G188020


Basic Information

Item Value
gene id G188020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78529063 ~ 78529333 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU213252
ttgttaatgttgtaaatgactattgtagctgaaaaaggctgatttttttatggaatatctacatcggcgtacagaggcctattatcagcaacaatcactcctgtgttccaatggcacgttgtgttagctaatccaagtttataattttaaaaggctaattgattattagaaaacccttttgcaattatgttagcaaaggtgaaaactgttgtactgattaaagaagcaataaaactggcatcctttagactagttgagtatctggagcata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213252 True 271 lncRNA 0.34 1 78529063 78529333

Neighbor

gene id symbol gene type direction distance location
LOC110496993 LOC106561317 coding upstream 9992 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 77500 78394108 ~ 78451563 (+)
LOC110496927 LOC106561319 coding upstream 176418 78348080 ~ 78352645 (+)
LOC110496871 LOC106561322 coding upstream 262263 78233903 ~ 78266800 (+)
LOC110502077 LOC106561326 coding upstream 462219 78047373 ~ 78066844 (+)
LOC110502110 LOC106561316 coding downstream 7694 78537027 ~ 78557268 (+)
LOC110497055 LOC106561315 coding downstream 48816 78578149 ~ 78580190 (+)
LOC118944149 NA coding downstream 402090 78931423 ~ 78931476 (+)
LOC110497132 pamr1 coding downstream 574241 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 647695 79177028 ~ 79235909 (+)
G187985 NA non-coding upstream 72874 78454561 ~ 78456189 (+)
G187919 NA non-coding upstream 159464 78366133 ~ 78369599 (+)
G187904 NA non-coding upstream 175147 78339166 ~ 78353916 (+)
G187878 NA non-coding upstream 228289 78296723 ~ 78300774 (+)
G187879 NA non-coding upstream 234510 78294037 ~ 78294553 (+)
G188023 NA non-coding downstream 5381 78534714 ~ 78534946 (+)
G188030 NA non-coding downstream 29421 78558754 ~ 78559351 (+)
G188031 NA non-coding downstream 30675 78560008 ~ 78560213 (+)
G188042 NA non-coding downstream 44226 78573559 ~ 78573771 (+)
G188282 NA non-coding downstream 105012 78634345 ~ 78634578 (+)
G187320 LOC106561323 other upstream 259018 78267289 ~ 78270045 (+)
G187260 NA other upstream 351480 78137513 ~ 78177583 (+)
LOC110496763 dynlrb2 other upstream 748270 77777066 ~ 77780795 (+)
G191052 NA other downstream 2225808 80755141 ~ 80756647 (+)
G191057 accs other downstream 2235999 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2536221 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 2554495 81083756 ~ 81086188 (+)

Expression


Co-expression Network