G188042


Basic Information

Item Value
gene id G188042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78573559 ~ 78573771 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU213274
gggtcttggtgattccaaacttcttccatttaagaatgatggccactgtgttcttggagaccttcaatgctgcagacatcttttggtaccccttccctagatctgtgcctcaacataatcctgtctcggagcgctacagacaattccttcaacctcatggcttggtttttgctctgacatgtactgtcaattgtgggaccttatgtgtgtgcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213274 True 213 lncRNA 0.46 1 78573559 78573771

Neighbor

gene id symbol gene type direction distance location
LOC110502110 LOC106561316 coding upstream 16291 78537027 ~ 78557268 (+)
LOC110496993 LOC106561317 coding upstream 54488 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 121996 78394108 ~ 78451563 (+)
LOC110496927 LOC106561319 coding upstream 220914 78348080 ~ 78352645 (+)
LOC110496871 LOC106561322 coding upstream 306759 78233903 ~ 78266800 (+)
LOC110497055 LOC106561315 coding downstream 4378 78578149 ~ 78580190 (+)
LOC118944149 NA coding downstream 357652 78931423 ~ 78931476 (+)
LOC110497132 pamr1 coding downstream 529803 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 603257 79177028 ~ 79235909 (+)
LOC110497165 lrrc4c coding downstream 1343151 79916922 ~ 80048182 (+)
G188031 NA non-coding upstream 13346 78560008 ~ 78560213 (+)
G188030 NA non-coding upstream 14208 78558754 ~ 78559351 (+)
G188023 NA non-coding upstream 38613 78534714 ~ 78534946 (+)
G188020 NA non-coding upstream 44226 78529063 ~ 78529333 (+)
G187985 NA non-coding upstream 117370 78454561 ~ 78456189 (+)
G188282 NA non-coding downstream 60574 78634345 ~ 78634578 (+)
G188287 NA non-coding downstream 65348 78639119 ~ 78639344 (+)
G188289 NA non-coding downstream 66211 78639982 ~ 78640200 (+)
G188293 NA non-coding downstream 68103 78641874 ~ 78642165 (+)
G188296 NA non-coding downstream 71024 78644795 ~ 78645142 (+)
G187320 LOC106561323 other upstream 303514 78267289 ~ 78270045 (+)
G187260 NA other upstream 395976 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 524759 78047373 ~ 78066844 (+)
LOC110496763 dynlrb2 other upstream 792766 77777066 ~ 77780795 (+)
G191052 NA other downstream 2181370 80755141 ~ 80756647 (+)
G191057 accs other downstream 2191561 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2491783 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 2510057 81083756 ~ 81086188 (+)

Expression


Co-expression Network