Gene
RNA
| Item | Value |
|---|---|
| gene id | G188289 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 78639982 ~ 78640200 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU213553 | True | 219 | lncRNA | 0.35 | 1 | 78639982 | 78640200 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497055 | LOC106561315 | coding | upstream | 59792 | 78578149 ~ 78580190 (+) |
| LOC110502110 | LOC106561316 | coding | upstream | 82714 | 78537027 ~ 78557268 (+) |
| LOC110496993 | LOC106561317 | coding | upstream | 120911 | 78467699 ~ 78519071 (+) |
| lrrc56 | lrrc56 | coding | upstream | 188419 | 78394108 ~ 78451563 (+) |
| LOC110496927 | LOC106561319 | coding | upstream | 287337 | 78348080 ~ 78352645 (+) |
| LOC118944149 | NA | coding | downstream | 291223 | 78931423 ~ 78931476 (+) |
| LOC110497132 | pamr1 | coding | downstream | 463374 | 79103574 ~ 79151359 (+) |
| LOC110497158 | LOC106573351 | coding | downstream | 536828 | 79177028 ~ 79235909 (+) |
| LOC110497165 | lrrc4c | coding | downstream | 1276722 | 79916922 ~ 80048182 (+) |
| rag2 | rag2 | coding | downstream | 2084160 | 80724360 ~ 80727535 (+) |
| G188287 | NA | non-coding | upstream | 638 | 78639119 ~ 78639344 (+) |
| G188282 | NA | non-coding | upstream | 5404 | 78634345 ~ 78634578 (+) |
| G188042 | NA | non-coding | upstream | 66211 | 78573559 ~ 78573771 (+) |
| G188031 | NA | non-coding | upstream | 79769 | 78560008 ~ 78560213 (+) |
| G188030 | NA | non-coding | upstream | 80631 | 78558754 ~ 78559351 (+) |
| G188293 | NA | non-coding | downstream | 1674 | 78641874 ~ 78642165 (+) |
| G188296 | NA | non-coding | downstream | 4595 | 78644795 ~ 78645142 (+) |
| G188312 | NA | non-coding | downstream | 12240 | 78652440 ~ 78652643 (+) |
| G188313 | NA | non-coding | downstream | 12951 | 78653151 ~ 78653357 (+) |
| G188328 | NA | non-coding | downstream | 26098 | 78666298 ~ 78666528 (+) |
| G187320 | LOC106561323 | other | upstream | 369937 | 78267289 ~ 78270045 (+) |
| G187260 | NA | other | upstream | 462399 | 78137513 ~ 78177583 (+) |
| LOC110502077 | LOC106561326 | other | upstream | 591182 | 78047373 ~ 78066844 (+) |
| G191052 | NA | other | downstream | 2114941 | 80755141 ~ 80756647 (+) |
| G191057 | accs | other | downstream | 2125132 | 80765332 ~ 80766714 (+) |
| LOC110497314 | cfap44 | other | downstream | 2425354 | 81058184 ~ 81080502 (+) |
| LOC110497320 | paf | other | downstream | 2443628 | 81083756 ~ 81086188 (+) |
| LOC110497665 | LOC106561427 | other | downstream | 3726085 | 82366183 ~ 82393779 (+) |
