G188293


Basic Information

Item Value
gene id G188293
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78641874 ~ 78642165 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU213557
acaaatcttcattgtaaagggtttaaatactgtttcccatgcttgttcaatgaaccataaacaattaatgaacatgcacctgtggaatggtcgttaagacgctaacagcttacagacggtaggcaattaaggtcacagttatgaaaacataggacactaaagttgactgactctgaaaaacatcaaaagaaagatgcccagggtccttgctcatctgcgtgaacgtgccttagacatgctgcaaggagtcatggggactgcagatgtggccagggtaataaattgcaatgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213557 True 292 lncRNA 0.42 1 78641874 78642165

Neighbor

gene id symbol gene type direction distance location
LOC110497055 LOC106561315 coding upstream 61684 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 84606 78537027 ~ 78557268 (+)
LOC110496993 LOC106561317 coding upstream 122803 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 190311 78394108 ~ 78451563 (+)
LOC110496927 LOC106561319 coding upstream 289229 78348080 ~ 78352645 (+)
LOC118944149 NA coding downstream 289258 78931423 ~ 78931476 (+)
LOC110497132 pamr1 coding downstream 461409 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 534863 79177028 ~ 79235909 (+)
LOC110497165 lrrc4c coding downstream 1274757 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 2082195 80724360 ~ 80727535 (+)
G188289 NA non-coding upstream 1674 78639982 ~ 78640200 (+)
G188287 NA non-coding upstream 2530 78639119 ~ 78639344 (+)
G188282 NA non-coding upstream 7296 78634345 ~ 78634578 (+)
G188042 NA non-coding upstream 68103 78573559 ~ 78573771 (+)
G188031 NA non-coding upstream 81661 78560008 ~ 78560213 (+)
G188296 NA non-coding downstream 2630 78644795 ~ 78645142 (+)
G188312 NA non-coding downstream 10275 78652440 ~ 78652643 (+)
G188313 NA non-coding downstream 10986 78653151 ~ 78653357 (+)
G188328 NA non-coding downstream 24133 78666298 ~ 78666528 (+)
G188339 NA non-coding downstream 29180 78671345 ~ 78671646 (+)
G187320 LOC106561323 other upstream 371829 78267289 ~ 78270045 (+)
G187260 NA other upstream 464291 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 593074 78047373 ~ 78066844 (+)
G191052 NA other downstream 2112976 80755141 ~ 80756647 (+)
G191057 accs other downstream 2123167 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2423389 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 2441663 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 3724120 82366183 ~ 82393779 (+)

Expression


Co-expression Network