G188296


Basic Information

Item Value
gene id G188296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 78644795 ~ 78645142 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU213560
ctttgcacactcttggcattctctgaaccagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttcactctgcagtccaactcatcccaaaccatctcaattgggttgaggttgggtgattgtggaggccaggtcatctgatgcagcactccattactctccttcttggtcaaatatcccttacacagcttggaggtgtgttggctcattgtcctgttgaaaaacaaacaaaagtgcaaatcagatgggatggcgcatcACTGTAcaatgctgtggttgccatggtggttaagtgtgccttgaatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU213560 True 348 lncRNA 0.47 1 78644795 78645142

Neighbor

gene id symbol gene type direction distance location
LOC110497055 LOC106561315 coding upstream 64605 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 87527 78537027 ~ 78557268 (+)
LOC110496993 LOC106561317 coding upstream 125724 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 193232 78394108 ~ 78451563 (+)
LOC110496927 LOC106561319 coding upstream 292150 78348080 ~ 78352645 (+)
LOC118944149 NA coding downstream 286281 78931423 ~ 78931476 (+)
LOC110497132 pamr1 coding downstream 458432 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 531886 79177028 ~ 79235909 (+)
LOC110497165 lrrc4c coding downstream 1271780 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 2079218 80724360 ~ 80727535 (+)
G188293 NA non-coding upstream 2630 78641874 ~ 78642165 (+)
G188289 NA non-coding upstream 4595 78639982 ~ 78640200 (+)
G188287 NA non-coding upstream 5451 78639119 ~ 78639344 (+)
G188282 NA non-coding upstream 10217 78634345 ~ 78634578 (+)
G188042 NA non-coding upstream 71024 78573559 ~ 78573771 (+)
G188312 NA non-coding downstream 7298 78652440 ~ 78652643 (+)
G188313 NA non-coding downstream 8009 78653151 ~ 78653357 (+)
G188328 NA non-coding downstream 21156 78666298 ~ 78666528 (+)
G188339 NA non-coding downstream 26203 78671345 ~ 78671646 (+)
G188369 NA non-coding downstream 47751 78692893 ~ 78693158 (+)
G187320 LOC106561323 other upstream 374750 78267289 ~ 78270045 (+)
G187260 NA other upstream 467212 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 595995 78047373 ~ 78066844 (+)
G191052 NA other downstream 2109999 80755141 ~ 80756647 (+)
G191057 accs other downstream 2120190 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2420412 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 2438686 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 3721143 82366183 ~ 82393779 (+)

Expression


Co-expression Network