G188745


Basic Information

Item Value
gene id G188745
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79044154 ~ 79044383 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU214044
AGATAAGGCACCTCATAGTGCATAAACCCTTCTCATTGTTAAAGTGAGGCTCTTTCCTAaggccccctcctctcccctccctaacCCTACATCTACCAGGAACAGGATTAAATGTTCTGGAGCGCCCTGCAGCTAGCTATCAACAAAAGGTGTAAAAGGGAACCAGATGAGATCAGGGAtagaaggaggagatggagggatagaaaaCCATTAGCTGGAAACCATTAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214044 True 230 lncRNA 0.47 1 79044154 79044383

Neighbor

gene id symbol gene type direction distance location
LOC118944149 NA coding upstream 112678 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 463964 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 486886 78537027 ~ 78557268 (+)
LOC110496993 LOC106561317 coding upstream 525083 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 592591 78394108 ~ 78451563 (+)
LOC110497132 pamr1 coding downstream 59191 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 132645 79177028 ~ 79235909 (+)
LOC110497165 lrrc4c coding downstream 872539 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 1679977 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 1735676 80780059 ~ 80977313 (+)
G188721 NA non-coding upstream 37835 79001094 ~ 79006319 (+)
G188577 NA non-coding upstream 180179 78863738 ~ 78863975 (+)
G188384 NA non-coding upstream 313659 78727674 ~ 78730495 (+)
G188376 NA non-coding upstream 332325 78711046 ~ 78711829 (+)
G188374 NA non-coding upstream 339165 78704705 ~ 78704989 (+)
G188888 NA non-coding downstream 53282 79097665 ~ 79097880 (+)
G188890 NA non-coding downstream 57017 79101400 ~ 79101723 (+)
G188945 NA non-coding downstream 130823 79175206 ~ 79175428 (+)
G188946 NA non-coding downstream 131122 79175505 ~ 79175821 (+)
G188965 NA non-coding downstream 152705 79197088 ~ 79197592 (+)
G187320 LOC106561323 other upstream 774109 78267289 ~ 78270045 (+)
G187260 NA other upstream 866571 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 995354 78047373 ~ 78066844 (+)
G191052 NA other downstream 1710758 80755141 ~ 80756647 (+)
G191057 accs other downstream 1720949 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 2021171 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 2039445 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 3321902 82366183 ~ 82393779 (+)

Expression


Co-expression Network