G188888


Basic Information

Item Value
gene id G188888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79097665 ~ 79097880 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU214192
gaaaacacgctaaagtttccaaaactgtcaaaatattgtctgtgagtataacagaactgatattgcaggcgaaaccctgaggaaaatcaaaacaggaagcggcttctattttgaaaactccatgttccatagcctccctttgctggatttaaagggatatgaaccagattccttttcctatcgcttcctcagggtgtcaacagtcttcagacatag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214192 True 216 lncRNA 0.41 1 79097665 79097880

Neighbor

gene id symbol gene type direction distance location
LOC118944149 NA coding upstream 166189 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 517475 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 540397 78537027 ~ 78557268 (+)
LOC110496993 LOC106561317 coding upstream 578594 78467699 ~ 78519071 (+)
lrrc56 lrrc56 coding upstream 646102 78394108 ~ 78451563 (+)
LOC110497132 pamr1 coding downstream 5694 79103574 ~ 79151359 (+)
LOC110497158 LOC106573351 coding downstream 79148 79177028 ~ 79235909 (+)
LOC110497165 lrrc4c coding downstream 819042 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 1626480 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 1682179 80780059 ~ 80977313 (+)
G188745 NA non-coding upstream 53282 79044154 ~ 79044383 (+)
G188721 NA non-coding upstream 91346 79001094 ~ 79006319 (+)
G188577 NA non-coding upstream 233690 78863738 ~ 78863975 (+)
G188384 NA non-coding upstream 367170 78727674 ~ 78730495 (+)
G188376 NA non-coding upstream 385836 78711046 ~ 78711829 (+)
G188890 NA non-coding downstream 3520 79101400 ~ 79101723 (+)
G188945 NA non-coding downstream 77326 79175206 ~ 79175428 (+)
G188946 NA non-coding downstream 77625 79175505 ~ 79175821 (+)
G188965 NA non-coding downstream 99208 79197088 ~ 79197592 (+)
G188990 NA non-coding downstream 140769 79238649 ~ 79238895 (+)
G187320 LOC106561323 other upstream 827620 78267289 ~ 78270045 (+)
G187260 NA other upstream 920082 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 1048865 78047373 ~ 78066844 (+)
G191052 NA other downstream 1657261 80755141 ~ 80756647 (+)
G191057 accs other downstream 1667452 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 1967674 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 1985948 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 3268405 82366183 ~ 82393779 (+)

Expression


Co-expression Network