Gene
RNA
| Item | Value |
|---|---|
| gene id | G188945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 79175206 ~ 79175428 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU214250 | True | 223 | lncRNA | 0.39 | 1 | 79175206 | 79175428 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497132 | pamr1 | coding | upstream | 23847 | 79103574 ~ 79151359 (+) |
| LOC118944149 | NA | coding | upstream | 243730 | 78931423 ~ 78931476 (+) |
| LOC110497055 | LOC106561315 | coding | upstream | 595016 | 78578149 ~ 78580190 (+) |
| LOC110502110 | LOC106561316 | coding | upstream | 617938 | 78537027 ~ 78557268 (+) |
| LOC110496993 | LOC106561317 | coding | upstream | 656135 | 78467699 ~ 78519071 (+) |
| LOC110497158 | LOC106573351 | coding | downstream | 1600 | 79177028 ~ 79235909 (+) |
| LOC110497165 | lrrc4c | coding | downstream | 741494 | 79916922 ~ 80048182 (+) |
| rag2 | rag2 | coding | downstream | 1548932 | 80724360 ~ 80727535 (+) |
| furinb | LOC106561302 | coding | downstream | 1604631 | 80780059 ~ 80977313 (+) |
| LOC110497237 | rccd1 | coding | downstream | 1815550 | 80988887 ~ 80994869 (+) |
| G188890 | NA | non-coding | upstream | 73483 | 79101400 ~ 79101723 (+) |
| G188888 | NA | non-coding | upstream | 77326 | 79097665 ~ 79097880 (+) |
| G188745 | NA | non-coding | upstream | 130823 | 79044154 ~ 79044383 (+) |
| G188721 | NA | non-coding | upstream | 168887 | 79001094 ~ 79006319 (+) |
| G188577 | NA | non-coding | upstream | 311231 | 78863738 ~ 78863975 (+) |
| G188946 | NA | non-coding | downstream | 77 | 79175505 ~ 79175821 (+) |
| G188965 | NA | non-coding | downstream | 21660 | 79197088 ~ 79197592 (+) |
| G188990 | NA | non-coding | downstream | 63221 | 79238649 ~ 79238895 (+) |
| G188991 | NA | non-coding | downstream | 64624 | 79240052 ~ 79240610 (+) |
| G188992 | NA | non-coding | downstream | 66240 | 79241668 ~ 79242328 (+) |
| G187320 | LOC106561323 | other | upstream | 905161 | 78267289 ~ 78270045 (+) |
| G187260 | NA | other | upstream | 997623 | 78137513 ~ 78177583 (+) |
| LOC110502077 | LOC106561326 | other | upstream | 1126406 | 78047373 ~ 78066844 (+) |
| G191052 | NA | other | downstream | 1579713 | 80755141 ~ 80756647 (+) |
| G191057 | accs | other | downstream | 1589904 | 80765332 ~ 80766714 (+) |
| LOC110497314 | cfap44 | other | downstream | 1890126 | 81058184 ~ 81080502 (+) |
| LOC110497320 | paf | other | downstream | 1908400 | 81083756 ~ 81086188 (+) |
| LOC110497665 | LOC106561427 | other | downstream | 3190857 | 82366183 ~ 82393779 (+) |
