G189606


Basic Information

Item Value
gene id G189606
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79626222 ~ 79626527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU214949
catttgcacagaAAAAAATCAtagaatgatggaaagacctgtgtgttgtccttgttaatgcagacagagaagagctccaacttcttaatcatagcttcaattttgtcccgcacattgaatataattgcggagagtccctgtaatcctagattcagatcagtcaggtgagaaaaaacatcacccagataggccagtcgtgtgagaaactcatcatcatgcaagcggtcagacaagtgaaaatgatggtcagtaaagaaaactttaagctcgtctctcaatttaaaaaaaaacttgtcaatacttttc

Function

NR:

description
zinc finger BED domain-containing protein 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU214949 True 306 lncRNA 0.38 1 79626222 79626527

Neighbor

gene id symbol gene type direction distance location
LOC110497158 LOC106573351 coding upstream 390313 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 474863 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 694746 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1046032 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 1068954 78537027 ~ 78557268 (+)
LOC110497165 lrrc4c coding downstream 290395 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 1097833 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 1153532 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 1364451 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 1402814 81029341 ~ 81031876 (+)
G189385 NA non-coding upstream 940 79526895 ~ 79625282 (+)
G189253 NA non-coding upstream 261405 79364614 ~ 79364817 (+)
G189241 NA non-coding upstream 268932 79357085 ~ 79357290 (+)
G188994 NA non-coding upstream 381104 79243615 ~ 79245118 (+)
G188992 NA non-coding upstream 383894 79241668 ~ 79242328 (+)
G189789 NA non-coding downstream 139997 79766524 ~ 79766735 (+)
G189825 NA non-coding downstream 156839 79783366 ~ 79783566 (+)
G189936 NA non-coding downstream 247090 79873617 ~ 79873863 (+)
G189939 NA non-coding downstream 248321 79874848 ~ 79875114 (+)
G189956 NA non-coding downstream 263477 79890004 ~ 79890742 (+)
LOC110496993 LOC106561317 other upstream 1119290 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 1356177 78267289 ~ 78270045 (+)
G187260 NA other upstream 1448639 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 1577422 78047373 ~ 78066844 (+)
G191052 NA other downstream 1128614 80755141 ~ 80756647 (+)
G191057 accs other downstream 1138805 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 1439027 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 1457301 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2739758 82366183 ~ 82393779 (+)

Expression


Co-expression Network