G189789


Basic Information

Item Value
gene id G189789
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79766524 ~ 79766735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215140
gaaTTGCTTCCGTTTAGGTGGTTGTGGAATTTAACGGCTGTTTTGGGGATTTtaataattagcgggtatcggcctaactCTGCTCTGCATgctttatttggtgttttacgttgtacacagaacatatttttacagaattctgcgtgcagagtcttaatttggtgtttgtcccattttgtgaattcttggttggtgagcggaccccagacctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215140 True 212 lncRNA 0.42 1 79766524 79766735

Neighbor

gene id symbol gene type direction distance location
LOC110497158 LOC106573351 coding upstream 530615 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 615165 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 835048 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1186334 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 1209256 78537027 ~ 78557268 (+)
LOC110497165 lrrc4c coding downstream 150187 79916922 ~ 80048182 (+)
rag2 rag2 coding downstream 957625 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 1013324 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 1224243 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 1262606 81029341 ~ 81031876 (+)
G189606 NA non-coding upstream 139997 79626222 ~ 79626527 (+)
G189385 NA non-coding upstream 141242 79526895 ~ 79625282 (+)
G189253 NA non-coding upstream 401707 79364614 ~ 79364817 (+)
G189241 NA non-coding upstream 409234 79357085 ~ 79357290 (+)
G188994 NA non-coding upstream 521406 79243615 ~ 79245118 (+)
G189825 NA non-coding downstream 16631 79783366 ~ 79783566 (+)
G189936 NA non-coding downstream 106882 79873617 ~ 79873863 (+)
G189939 NA non-coding downstream 108113 79874848 ~ 79875114 (+)
G189956 NA non-coding downstream 123269 79890004 ~ 79890742 (+)
G190022 NA non-coding downstream 182151 79948886 ~ 79949176 (+)
LOC110496993 LOC106561317 other upstream 1259592 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 1496479 78267289 ~ 78270045 (+)
G187260 NA other upstream 1588941 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 1717724 78047373 ~ 78066844 (+)
G191052 NA other downstream 988406 80755141 ~ 80756647 (+)
G191057 accs other downstream 998597 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 1298819 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 1317093 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2599550 82366183 ~ 82393779 (+)

Expression


Co-expression Network