G190022


Basic Information

Item Value
gene id G190022
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 79948886 ~ 79949176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215374
ctttcatcctttctttctcactttcttcctcccacctctctgtgtctgtctagcGAAGACACCTAGTTAAGGGAATTTGTCATTTCCAAAATTCCTTACACCTATCCATTTGATTGATCAGGTTTAACTTATAGCTAGACAACTCAATATGACAGACATACAACTATATCATtggaggctactgaggggaggatggctcataataatgtctggaatagagtcaattgaatggtatcaaccacatggaaatcacgtgtttaataccattccagacattattatgagccatcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215374 True 291 lncRNA 0.39 1 79948886 79949176

Neighbor

gene id symbol gene type direction distance location
LOC110497158 LOC106573351 coding upstream 712977 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 797527 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1017410 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1368696 78578149 ~ 78580190 (+)
LOC110502110 LOC106561316 coding upstream 1391618 78537027 ~ 78557268 (+)
rag2 rag2 coding downstream 775184 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 830883 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 1041802 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 1080165 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 1082823 81031999 ~ 81033476 (+)
G189956 NA non-coding upstream 58144 79890004 ~ 79890742 (+)
G189939 NA non-coding upstream 73772 79874848 ~ 79875114 (+)
G189936 NA non-coding upstream 75023 79873617 ~ 79873863 (+)
G189825 NA non-coding upstream 165320 79783366 ~ 79783566 (+)
G189789 NA non-coding upstream 182151 79766524 ~ 79766735 (+)
G190024 NA non-coding downstream 4976 79954152 ~ 79960747 (+)
G190062 NA non-coding downstream 90507 80039683 ~ 80039883 (+)
G190063 NA non-coding downstream 91035 80040211 ~ 80040444 (+)
G190074 NA non-coding downstream 112992 80062168 ~ 80063084 (+)
G190085 NA non-coding downstream 125918 80075094 ~ 80075378 (+)
LOC110496993 LOC106561317 other upstream 1441954 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 1678841 78267289 ~ 78270045 (+)
G187260 NA other upstream 1771303 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 1900086 78047373 ~ 78066844 (+)
G191052 NA other downstream 805965 80755141 ~ 80756647 (+)
G191057 accs other downstream 816156 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 1116378 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 1134652 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2417109 82366183 ~ 82393779 (+)

Expression


Co-expression Network