XLOC_002136


Basic Information

Item Value
gene id XLOC_002136
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 24316853 ~ 24375160 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00004129
CTGCACCAGAGAACAAGACACAAACGTATCACCAATAAATAATGGATGCATTTACTAATCAAAATTACATATCTGAAAGAAAGCAAATACACATTAATGAAAACAAGGCAATTAACCACCAACAAACGACAAAAAAACAGCACAAGTCAACTTAAAGCTCATTTTTAGATACAAATTCTCAAAGCTATTGACTCAGGACACCTGAAGGACTCTCTGTTGCTGTATCTTCCACAGAGGTTAAAGGCTTCATCCAGCGTTCGGGACACTTCCTCATTGGCCTCATCGTCTGAGCTGAGATCCTCCAAACAGGTCAGCAACTGAGCGAGTCTCTGACGAAGTATGAACCGTGCTGAAGTAGACTGAGACGTCATGGTGGACATACTGTCAGAGCGCATGCGTGGGACATCAAATGTGTCAGACATCTTGCTATGGCTTATACAAACCAAGAGTTTATCTGAAATTACAATTGTTCATGAGACTAGACGACGACAAGAAAAGCTGAGAGAGACAGAAGCAGAAGGATGTGGTATCAGAGTTTTCCTGAAGTAGAGCAAGTAGAGCGGCAACAGAAATCCCAGCATACTGACAACCAGCAGACCAACGTTCACCTGCACCAGAAAGCAAAGATTATGAAGAAGAGGGGTCCCATCATGGCCATGAACAAAGGCTGTTGCAGCAGAGCGAATAAAGCACTAACCAGAGACTGCATTCCAGTCAGACTGCCGAACTGAGATGATGGGTACCTGCACACAAACAAATATGATGTGTTATTATGTGCTTTATCACTGATTAAACTGATCATGCATTGGACTGATAAACTCACACAGCAGCGTAAAGTCCACCGATGGCAGAGTGGATGAAGCCTCTGACGATGGTGTGAAGGACAAACGAGAGCATCTGAAGAGAGGTGACATGACAAAAAAGATATTAGagacttgtttatttattctgttgttc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00004129 True 957 lncRNA 0.43 4 24316853 24375160

Neighbor

gene id symbol gene type direction distance location
XLOC_002133 gbe1a coding upstream 18811 24048663 ~ 24298042 (+)
XLOC_002135 NA coding upstream 219543 24097055 ~ 24097310 (+)
XLOC_002134 NA coding upstream 220383 24096239 ~ 24096470 (+)
XLOC_002132 NA coding upstream 323936 23983307 ~ 23992917 (+)
XLOC_002131 NA coding upstream 725795 23588675 ~ 23591058 (+)
XLOC_002138 CT573163.1 coding downstream 21938 24397098 ~ 24398671 (+)
XLOC_002139 NA coding downstream 29530 24404690 ~ 24412025 (+)
XLOC_002140 paxbp1 coding downstream 46857 24422017 ~ 24493323 (+)
XLOC_002141 mtus2a coding downstream 129132 24504292 ~ 24622317 (+)
XLOC_002142 slc46a3 coding downstream 252523 24627683 ~ 24641400 (+)
XLOC_002128 NA non-coding upstream 772787 23542617 ~ 23544066 (+)
XLOC_002144 NA non-coding downstream 275703 24650863 ~ 24655184 (+)
XLOC_002147 NA non-coding downstream 440144 24815304 ~ 24819159 (+)
XLOC_002148 NA non-coding downstream 459599 24834759 ~ 24835445 (+)

Expression


Co-expression Network