G190320


Basic Information

Item Value
gene id G190320
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80186488 ~ 80186930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215685
gtgTCACGCTCGTCATAATGATtggatgcagcgtggtatgtttccatcccttttatttggaagagaaacttagaacaaaaacaataaagcgaTCAAACGAAATGTGCCGCTAATAtaatgctcacaggcaactataccgagacaagatcccacaaagcacaatggggaaatggctacctaaatatgatccccaatcagagacaacgataaacagctgcctctgattgggaaccataccaggccaacatagacatataattcccctagataacccacccttaatcacaccccgacctaaccaacatagagaataaaaagctctctatggtcagggcgtgacaccatgcTTGACCAAGAGATGTTCAATGAATGATTTGATATTGTTGCcgatctaccaatcactgccatTTTATGAGGCTTTCGAAAGGCTACCTGGTCTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215685 True 443 lncRNA 0.42 1 80186488 80186930

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 138306 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 950579 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1035129 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1255012 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1606298 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 537430 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 593129 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 804048 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 842411 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 845069 81031999 ~ 81033476 (+)
G190202 NA non-coding upstream 87901 80098036 ~ 80098587 (+)
G190193 NA non-coding upstream 93167 80093112 ~ 80093321 (+)
G190182 NA non-coding upstream 98633 80087493 ~ 80087855 (+)
G190090 NA non-coding upstream 106896 80079375 ~ 80079592 (+)
G190085 NA non-coding upstream 111110 80075094 ~ 80075378 (+)
G190411 NA non-coding downstream 59482 80246412 ~ 80246632 (+)
G190422 NA non-coding downstream 66047 80252977 ~ 80253259 (+)
G190445 NA non-coding downstream 80496 80267426 ~ 80267646 (+)
G190459 NA non-coding downstream 89454 80276384 ~ 80276632 (+)
G190463 NA non-coding downstream 90247 80277177 ~ 80277519 (+)
LOC110496993 LOC106561317 other upstream 1679556 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 1916443 78267289 ~ 78270045 (+)
G187260 NA other upstream 2008905 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2137688 78047373 ~ 78066844 (+)
G191052 NA other downstream 568211 80755141 ~ 80756647 (+)
G191057 accs other downstream 578402 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 878624 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 896898 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2179355 82366183 ~ 82393779 (+)

Expression


Co-expression Network