G190377



Basic Information


Item Value
gene id G190377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80224961 ~ 80225265 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU215742
tcccaagtccctctttgtggcacttgaccacacaactgaacagtagtccaggtgcgacaaaactagggcctgtaggacctgccttgttgatagtgctgttaagaatgcagagcagcgctttattatagacagacttctccccatcctagctactgttgtatcaatatgttttgaccatgacagtttataatccagggttactccaagcagtttagtgtCCTCAATTTACTAAATGTCCACATGATTTAtttcaagatttagttgaggttcagggtttagtgaatgatttgtcccaaaaacAATGC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU215742 True 305 lncRNA 0.42 1 80224961 80225265

Neighbor


gene id symbol gene type direction distance location
ehf ehf coding downstream 830972 79386283 ~ 79393989 (-)
LOC110502133 pdhx coding downstream 874913 79304316 ~ 79350048 (-)
LOC110502122 LOC106561308 coding downstream 947985 79243612 ~ 79276976 (-)
LOC110497116 fjx1 coding downstream 1174999 79047432 ~ 79049962 (-)
LOC110497088 trim44 coding downstream 1226699 78926451 ~ 78998262 (-)
iftap cssa10h11orf74 coding upstream 482834 80708099 ~ 80725419 (-)
rag1 rag1 coding upstream 502638 80727903 ~ 80734996 (-)
si:ch211-256a21.4 LOC106561345 coding upstream 529785 80755050 ~ 80765470 (-)
accs accs coding upstream 540690 80765955 ~ 80776358 (-)
LOC110497262 cib1 coding upstream 769757 80995022 ~ 80999005 (-)
G190327 NA non-coding downstream 35236 80189501 ~ 80189725 (-)
G190215 NA non-coding downstream 110724 80099885 ~ 80114237 (-)
G190201 NA non-coding downstream 128194 80096559 ~ 80096767 (-)
G190184 NA non-coding downstream 136498 80088240 ~ 80088463 (-)
G190183 NA non-coding downstream 137116 80087464 ~ 80087845 (-)
G190392 NA non-coding upstream 6800 80232065 ~ 80232307 (-)
G190396 NA non-coding upstream 9598 80234863 ~ 80235081 (-)
G190409 NA non-coding upstream 20030 80245295 ~ 80245503 (-)
G190437 NA non-coding upstream 36466 80261731 ~ 80261947 (-)
G190461 NA non-coding upstream 51258 80276523 ~ 80276771 (-)
G189806 NA other downstream 464334 79760039 ~ 79760627 (-)
G189256 NA other downstream 858392 79365849 ~ 79366569 (-)
G189093 slc1a2 other downstream 999963 79223230 ~ 79224998 (-)
G188257 NA other downstream 1607654 78616582 ~ 78617307 (-)
G187579 LOC106561332 other downstream 2521472 77702899 ~ 77703489 (-)
G190857 NA other upstream 326862 80552127 ~ 80552484 (-)
G191669 LOC100380853 other upstream 690414 80915679 ~ 80921415 (-)
cart2 LOC105018397 other upstream 967263 81192528 ~ 81194099 (-)
G193745 NA other upstream 2676375 82901640 ~ 82912504 (-)
G193755 NA other upstream 2780565 83005830 ~ 83007976 (-)

Expression



Co-expression Network