G190422


Basic Information

Item Value
gene id G190422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80252977 ~ 80253259 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215787
tgcgctgacacactggcaagtgtcttcaatgacatgttcaacctcttcTTGTCCGagtttgtaataccaacatgttttaagcagaccaccatagtgcctgtgcccaagaacactaaggtaacctgcctaaattactactgacccgtagcactcacttttgtaaccatgaagtgctttgaaaggctggtcatggctcacatcaacaccatcatcccagagaCCCTACACCCACTCCATTTTGCATAACGCTGCAACAGATccccagatgatgcaatctctacac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU215787 True 283 lncRNA 0.45 1 80252977 80253259

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 204795 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1017068 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1101618 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1321501 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1672787 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 471101 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 526800 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 737719 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 776082 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 778740 81031999 ~ 81033476 (+)
G190411 NA non-coding upstream 6345 80246412 ~ 80246632 (+)
G190320 NA non-coding upstream 66047 80186488 ~ 80186930 (+)
G190202 NA non-coding upstream 154390 80098036 ~ 80098587 (+)
G190193 NA non-coding upstream 159656 80093112 ~ 80093321 (+)
G190182 NA non-coding upstream 165122 80087493 ~ 80087855 (+)
G190445 NA non-coding downstream 14167 80267426 ~ 80267646 (+)
G190459 NA non-coding downstream 23125 80276384 ~ 80276632 (+)
G190463 NA non-coding downstream 23918 80277177 ~ 80277519 (+)
G190467 NA non-coding downstream 25636 80278895 ~ 80279102 (+)
G190470 NA non-coding downstream 28552 80281811 ~ 80282014 (+)
LOC110496993 LOC106561317 other upstream 1746045 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 1982932 78267289 ~ 78270045 (+)
G187260 NA other upstream 2075394 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2204177 78047373 ~ 78066844 (+)
G191052 NA other downstream 501882 80755141 ~ 80756647 (+)
G191057 accs other downstream 512073 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 812295 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 830569 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2113026 82366183 ~ 82393779 (+)

Expression


Co-expression Network