G190461



Basic Information


Item Value
gene id G190461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80276523 ~ 80276771 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU215826
TGGACTTAATATTTTTTCAGCAAAGGACAAAGGTTAAACGAAATAAGTTTGGACCCACCAagtctctttctagagctggctgcctggccaaactgagcaatcagggaagaagggtcttggtcagggaggtgaccaagaaccagatggtcactctgacagagctccagagttcttctgtggagatgggagaaccttccagaaggacaaccatctctgcagcacttcaccaatcaggcctttatggtagag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU215826 True 249 lncRNA 0.55 1 80276523 80276771

Neighbor


gene id symbol gene type direction distance location
ehf ehf coding downstream 882534 79386283 ~ 79393989 (-)
LOC110502133 pdhx coding downstream 926475 79304316 ~ 79350048 (-)
LOC110502122 LOC106561308 coding downstream 999547 79243612 ~ 79276976 (-)
LOC110497116 fjx1 coding downstream 1226561 79047432 ~ 79049962 (-)
LOC110497088 trim44 coding downstream 1278261 78926451 ~ 78998262 (-)
iftap cssa10h11orf74 coding upstream 431328 80708099 ~ 80725419 (-)
rag1 rag1 coding upstream 451132 80727903 ~ 80734996 (-)
si:ch211-256a21.4 LOC106561345 coding upstream 478279 80755050 ~ 80765470 (-)
accs accs coding upstream 489184 80765955 ~ 80776358 (-)
LOC110497262 cib1 coding upstream 718251 80995022 ~ 80999005 (-)
G190437 NA non-coding downstream 14576 80261731 ~ 80261947 (-)
G190409 NA non-coding downstream 31020 80245295 ~ 80245503 (-)
G190396 NA non-coding downstream 41442 80234863 ~ 80235081 (-)
G190392 NA non-coding downstream 44216 80232065 ~ 80232307 (-)
G190377 NA non-coding downstream 51258 80224961 ~ 80225265 (-)
G190477 NA non-coding upstream 6731 80283502 ~ 80283735 (-)
G190484 NA non-coding upstream 12110 80288881 ~ 80289116 (-)
G190566 NA non-coding upstream 65335 80342106 ~ 80342444 (-)
G190576 NA non-coding upstream 70885 80347656 ~ 80347904 (-)
G190577 NA non-coding upstream 71236 80348007 ~ 80348548 (-)
G189806 NA other downstream 515896 79760039 ~ 79760627 (-)
G189256 NA other downstream 909954 79365849 ~ 79366569 (-)
G189093 slc1a2 other downstream 1051525 79223230 ~ 79224998 (-)
G188257 NA other downstream 1659216 78616582 ~ 78617307 (-)
G187579 LOC106561332 other downstream 2573034 77702899 ~ 77703489 (-)
G190857 NA other upstream 275356 80552127 ~ 80552484 (-)
G191669 LOC100380853 other upstream 638908 80915679 ~ 80921415 (-)
cart2 LOC105018397 other upstream 915757 81192528 ~ 81194099 (-)
G193745 NA other upstream 2624869 82901640 ~ 82912504 (-)
G193755 NA other upstream 2729059 83005830 ~ 83007976 (-)

Expression



Co-expression Network