G190463


Basic Information

Item Value
gene id G190463
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80277177 ~ 80277519 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215828
CACTGCAGTGGcccagagctttttcatgcgcgagaccgagagcgcgcctttcttgtttaccttttatattgacgacgttattgtccagtTTAAATATtgtcgattatttaggctaaaaacaatcaGAGGATttattataaacatcgtttgacatgtttctacgaactttacggatactattttgatttttttgtctgcctgttgtgactgcgtttgagcctgtggattactgaacaaaacgcgtgaacaaaacagaggtttttggatataaacatggactttatcgaacaaaacaaacatttattgagtaaatgggagtctcgtgagtgcaaccatatgaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215828 True 343 lncRNA 0.40 1 80277177 80277519

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 228995 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1041268 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1125818 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1345701 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1696987 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 446841 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 502540 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 713459 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 751822 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 754480 81031999 ~ 81033476 (+)
G190459 NA non-coding upstream 545 80276384 ~ 80276632 (+)
G190445 NA non-coding upstream 9531 80267426 ~ 80267646 (+)
G190422 NA non-coding upstream 23918 80252977 ~ 80253259 (+)
G190411 NA non-coding upstream 30545 80246412 ~ 80246632 (+)
G190320 NA non-coding upstream 90247 80186488 ~ 80186930 (+)
G190467 NA non-coding downstream 1376 80278895 ~ 80279102 (+)
G190470 NA non-coding downstream 4292 80281811 ~ 80282014 (+)
G190473 NA non-coding downstream 4694 80282213 ~ 80282470 (+)
G190476 NA non-coding downstream 5964 80283483 ~ 80283727 (+)
G190480 NA non-coding downstream 8876 80286395 ~ 80286959 (+)
LOC110496993 LOC106561317 other upstream 1770245 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2007132 78267289 ~ 78270045 (+)
G187260 NA other upstream 2099594 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2228377 78047373 ~ 78066844 (+)
G191052 NA other downstream 477622 80755141 ~ 80756647 (+)
G191057 accs other downstream 487813 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 788035 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 806309 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2088766 82366183 ~ 82393779 (+)

Expression


Co-expression Network