G190575


Basic Information

Item Value
gene id G190575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80347656 ~ 80347950 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU215942
caaacactaccaaataaagaacgtgatgaacgtaacgaaaacctaaacagcctatctggtgaaaacacatagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgatgaacacctgcctctgactgagaaccatatcaggctgaacatagaaatagacaaacaagacatgaaacatagaatgcccactcagatcacaccctgaccaatcaaaacatagaaaatacaaagtaaactatggtcagggcgtgacagtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU215942 True 295 lncRNA 0.41 1 80347656 80347950

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 299474 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1111747 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1196297 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1416180 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1767466 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 376410 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 432109 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 643028 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 681391 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 684049 81031999 ~ 81033476 (+)
G190565 NA non-coding upstream 5695 80341735 ~ 80341961 (+)
G190523 NA non-coding upstream 6223 80315392 ~ 80341433 (+)
G190526 NA non-coding upstream 25714 80320710 ~ 80321942 (+)
G190513 NA non-coding upstream 40394 80307018 ~ 80307262 (+)
G190480 NA non-coding upstream 60697 80286395 ~ 80286959 (+)
G190578 NA non-coding downstream 2682 80350632 ~ 80350887 (+)
G190654 NA non-coding downstream 76717 80424667 ~ 80436799 (+)
G190742 NA non-coding downstream 122088 80470038 ~ 80470283 (+)
G190760 NA non-coding downstream 135226 80483176 ~ 80483451 (+)
G190832 NA non-coding downstream 188877 80536827 ~ 80537335 (+)
LOC110496993 LOC106561317 other upstream 1840724 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2077611 78267289 ~ 78270045 (+)
G187260 NA other upstream 2170073 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2298856 78047373 ~ 78066844 (+)
G191052 NA other downstream 407191 80755141 ~ 80756647 (+)
G191057 accs other downstream 417382 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 717604 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 735878 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 2018335 82366183 ~ 82393779 (+)

Expression


Co-expression Network