G190576



Basic Information


Item Value
gene id G190576
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80347656 ~ 80347904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU215943
tgattggtcagggtgtgatctgagtgggcattctatgtttcatgtcttgtttgtctatttctatgttcagcctgatatggttctcagtcagaggcaggtgttcatcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagataggctgtttaggttttcgttacgttcatcacgttctttatttggtagtgtttg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU215943 True 249 lncRNA 0.40 1 80347656 80347904

Neighbor


gene id symbol gene type direction distance location
ehf ehf coding downstream 953667 79386283 ~ 79393989 (-)
LOC110502133 pdhx coding downstream 997608 79304316 ~ 79350048 (-)
LOC110502122 LOC106561308 coding downstream 1070680 79243612 ~ 79276976 (-)
LOC110497116 fjx1 coding downstream 1297694 79047432 ~ 79049962 (-)
LOC110497088 trim44 coding downstream 1349394 78926451 ~ 78998262 (-)
iftap cssa10h11orf74 coding upstream 360195 80708099 ~ 80725419 (-)
rag1 rag1 coding upstream 379999 80727903 ~ 80734996 (-)
si:ch211-256a21.4 LOC106561345 coding upstream 407146 80755050 ~ 80765470 (-)
accs accs coding upstream 418051 80765955 ~ 80776358 (-)
LOC110497262 cib1 coding upstream 647118 80995022 ~ 80999005 (-)
G190566 NA non-coding downstream 5212 80342106 ~ 80342444 (-)
G190484 NA non-coding downstream 58540 80288881 ~ 80289116 (-)
G190477 NA non-coding downstream 63921 80283502 ~ 80283735 (-)
G190461 NA non-coding downstream 70885 80276523 ~ 80276771 (-)
G190437 NA non-coding downstream 85709 80261731 ~ 80261947 (-)
G190577 NA non-coding upstream 103 80348007 ~ 80348548 (-)
G190579 NA non-coding upstream 2748 80350652 ~ 80350856 (-)
G190761 NA non-coding upstream 135267 80483171 ~ 80483602 (-)
G190825 NA non-coding upstream 184971 80532875 ~ 80533515 (-)
G190901 NA non-coding upstream 231736 80579640 ~ 80580696 (-)
G189806 NA other downstream 587029 79760039 ~ 79760627 (-)
G189256 NA other downstream 981087 79365849 ~ 79366569 (-)
G189093 slc1a2 other downstream 1122658 79223230 ~ 79224998 (-)
G188257 NA other downstream 1730349 78616582 ~ 78617307 (-)
G187579 LOC106561332 other downstream 2644167 77702899 ~ 77703489 (-)
G190857 NA other upstream 204223 80552127 ~ 80552484 (-)
G191669 LOC100380853 other upstream 567775 80915679 ~ 80921415 (-)
cart2 LOC105018397 other upstream 844624 81192528 ~ 81194099 (-)
G193745 NA other upstream 2553736 82901640 ~ 82912504 (-)
G193755 NA other upstream 2657926 83005830 ~ 83007976 (-)

Expression



Co-expression Network