G190742


Basic Information

Item Value
gene id G190742
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80470038 ~ 80470283 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216117
ctgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttcaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtggcaaagttcaagggggccgaatactttcgcaaggcactgtatcagtgAATAACACCTCatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216117 True 246 lncRNA 0.55 1 80470038 80470283

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 421856 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1234129 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1318679 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1538562 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1889848 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 254077 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 309776 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 520695 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 559058 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 561716 81031999 ~ 81033476 (+)
G190654 NA non-coding upstream 33239 80424667 ~ 80436799 (+)
G190578 NA non-coding upstream 119151 80350632 ~ 80350887 (+)
G190575 NA non-coding upstream 122088 80347656 ~ 80347950 (+)
G190565 NA non-coding upstream 128077 80341735 ~ 80341961 (+)
G190523 NA non-coding upstream 128605 80315392 ~ 80341433 (+)
G190760 NA non-coding downstream 12893 80483176 ~ 80483451 (+)
G190832 NA non-coding downstream 66544 80536827 ~ 80537335 (+)
G190856 NA non-coding downstream 81751 80552034 ~ 80552453 (+)
G190890 NA non-coding downstream 103278 80573561 ~ 80573765 (+)
G190897 NA non-coding downstream 107953 80578236 ~ 80578455 (+)
LOC110496993 LOC106561317 other upstream 1963106 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2199993 78267289 ~ 78270045 (+)
G187260 NA other upstream 2292455 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2421238 78047373 ~ 78066844 (+)
G191052 NA other downstream 284858 80755141 ~ 80756647 (+)
G191057 accs other downstream 295049 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 595271 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 613545 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1896002 82366183 ~ 82393779 (+)

Expression


Co-expression Network