G190760


Basic Information

Item Value
gene id G190760
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80483176 ~ 80483451 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216135
aatttgatacatcattaacgtttattaatacctaaagttggtttagaaaagtcgtttgaagtgatttgtaaaagtttataggcgacttttgtaattttaaaaagtgacgttgcgtcttgtaaatgggctttttgcagcatcagactggccttcagcaaattacattttgggtatacaatgacggatttaatcgggaaaaagacccaattgtgatgtttatgggacatataggagtgccaacaaagaagctcgtccaaggtaatgaatgtttaatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216135 True 276 lncRNA 0.41 1 80483176 80483451

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 434994 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1247267 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1331817 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1551700 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1902986 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 240909 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 296608 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 507527 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 545890 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 548548 81031999 ~ 81033476 (+)
G190742 NA non-coding upstream 12893 80470038 ~ 80470283 (+)
G190654 NA non-coding upstream 46377 80424667 ~ 80436799 (+)
G190578 NA non-coding upstream 132289 80350632 ~ 80350887 (+)
G190575 NA non-coding upstream 135226 80347656 ~ 80347950 (+)
G190565 NA non-coding upstream 141215 80341735 ~ 80341961 (+)
G190832 NA non-coding downstream 53376 80536827 ~ 80537335 (+)
G190856 NA non-coding downstream 68583 80552034 ~ 80552453 (+)
G190890 NA non-coding downstream 90110 80573561 ~ 80573765 (+)
G190897 NA non-coding downstream 94785 80578236 ~ 80578455 (+)
G190898 NA non-coding downstream 95626 80579077 ~ 80579324 (+)
LOC110496993 LOC106561317 other upstream 1976244 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2213131 78267289 ~ 78270045 (+)
G187260 NA other upstream 2305593 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2434376 78047373 ~ 78066844 (+)
G191052 NA other downstream 271690 80755141 ~ 80756647 (+)
G191057 accs other downstream 281881 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 582103 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 600377 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1882834 82366183 ~ 82393779 (+)

Expression


Co-expression Network