G190825


Basic Information

Item Value
gene id G190825
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80532875 ~ 80533515 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216200
AACttcattcgtaaaaatccaaataacttcacagatcttcattgtaaagggtttaacctctctgatctccccatcccggatccggtatcgtgactacagcctcaagctcattaccataacgcaatgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagtcttttgtaaacaacactgtcatctcaaattttcaaaatatgcttctcaaccatagaaaaacaatcatttgtgtaaaagtagctagctagcgtagcatttagcgttagcattagcgttagcatccagcacgcaacatttcaacaaaaacataaaatccttaaaataaaataatttacctttgaagaacttcggatgttttcaatgaggagactctcagttagatagcaaatgctcagttttttccaaaaagattctttgtgtattagaaatagctccgttttgtacatcacatttggctacaaaaaacccccgaaaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgtggtttagaatcaatcctcaaggtgtttttcacatatctcttcgatgatatatcgttcgtggaagcatggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216200 True 641 lncRNA 0.35 1 80532875 80533515

Neighbor

gene id symbol gene type direction distance location
ehf ehf coding downstream 1138886 79386283 ~ 79393989 (-)
LOC110502133 pdhx coding downstream 1182827 79304316 ~ 79350048 (-)
LOC110502122 LOC106561308 coding downstream 1255899 79243612 ~ 79276976 (-)
LOC110497116 fjx1 coding downstream 1482913 79047432 ~ 79049962 (-)
LOC110497088 trim44 coding downstream 1534613 78926451 ~ 78998262 (-)
iftap cssa10h11orf74 coding upstream 174584 80708099 ~ 80725419 (-)
rag1 rag1 coding upstream 194388 80727903 ~ 80734996 (-)
si:ch211-256a21.4 LOC106561345 coding upstream 221535 80755050 ~ 80765470 (-)
accs accs coding upstream 232440 80765955 ~ 80776358 (-)
LOC110497262 cib1 coding upstream 461507 80995022 ~ 80999005 (-)
G190761 NA non-coding downstream 49273 80483171 ~ 80483602 (-)
G190579 NA non-coding downstream 182019 80350652 ~ 80350856 (-)
G190577 NA non-coding downstream 184327 80348007 ~ 80348548 (-)
G190576 NA non-coding downstream 184971 80347656 ~ 80347904 (-)
G190566 NA non-coding downstream 190431 80342106 ~ 80342444 (-)
G190901 NA non-coding upstream 46125 80579640 ~ 80580696 (-)
G190903 NA non-coding upstream 49084 80582599 ~ 80582830 (-)
G190904 NA non-coding upstream 49399 80582914 ~ 80583158 (-)
G190905 NA non-coding upstream 49917 80583432 ~ 80583679 (-)
G190936 NA non-coding upstream 75068 80608583 ~ 80608846 (-)
G189806 NA other downstream 772248 79760039 ~ 79760627 (-)
G189256 NA other downstream 1166306 79365849 ~ 79366569 (-)
G189093 slc1a2 other downstream 1307877 79223230 ~ 79224998 (-)
G188257 NA other downstream 1915568 78616582 ~ 78617307 (-)
G187579 LOC106561332 other downstream 2829386 77702899 ~ 77703489 (-)
G190857 NA other upstream 18612 80552127 ~ 80552484 (-)
G191669 LOC100380853 other upstream 382164 80915679 ~ 80921415 (-)
cart2 LOC105018397 other upstream 659013 81192528 ~ 81194099 (-)
G193745 NA other upstream 2368125 82901640 ~ 82912504 (-)
G193755 NA other upstream 2472315 83005830 ~ 83007976 (-)

Expression


Co-expression Network