G190832


Basic Information

Item Value
gene id G190832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80536827 ~ 80537335 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216207
TTACCTGATGCTATGTCATAACGCTGTCTACCTTAAACCCTTCTCTGAAACAATTATAGCATTGACTTCTATACATGCCAGGAACATAAACAGATGTGGTTATATTGtccaaaatcggcagtgtttcccacttacaaagaatgtagaggtctgtaatttttatcatgggtacacttcaactgtgagagacggaatcttaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattgcatgacataagtatttgatacatcagaaaagcagaacttaatatttggtacagaaacctgtttgcaattacagagatcatacgtttcctgtagttcttgaccacgtttgcacacactgtagcagggattttggccaactcttccagatccttcaggtttcggggctgttgctgggcaatacggactttcagctccctccaaagattttctattgggttcaggtctggagactggctaggccactccaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216207 True 509 lncRNA 0.39 1 80536827 80537335

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 488645 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1300918 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1385468 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1605351 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1956637 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 187025 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 242724 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 453643 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 492006 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 494664 81031999 ~ 81033476 (+)
G190760 NA non-coding upstream 53376 80483176 ~ 80483451 (+)
G190742 NA non-coding upstream 66544 80470038 ~ 80470283 (+)
G190654 NA non-coding upstream 100028 80424667 ~ 80436799 (+)
G190578 NA non-coding upstream 185940 80350632 ~ 80350887 (+)
G190575 NA non-coding upstream 188877 80347656 ~ 80347950 (+)
G190856 NA non-coding downstream 14699 80552034 ~ 80552453 (+)
G190890 NA non-coding downstream 36226 80573561 ~ 80573765 (+)
G190897 NA non-coding downstream 40901 80578236 ~ 80578455 (+)
G190898 NA non-coding downstream 41742 80579077 ~ 80579324 (+)
G190902 NA non-coding downstream 45270 80582605 ~ 80582999 (+)
LOC110496993 LOC106561317 other upstream 2029895 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2266782 78267289 ~ 78270045 (+)
G187260 NA other upstream 2359244 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2488027 78047373 ~ 78066844 (+)
G191052 NA other downstream 217806 80755141 ~ 80756647 (+)
G191057 accs other downstream 227997 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 528219 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 546493 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1828950 82366183 ~ 82393779 (+)

Expression


Co-expression Network