G190856


Basic Information

Item Value
gene id G190856
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80552034 ~ 80552453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216231
gttaatactttgtagcgccacctttttctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggagatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216231 True 420 lncRNA 0.44 1 80552034 80552453

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 503852 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1316125 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1400675 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1620558 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 1971844 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 171907 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 227606 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 438525 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 476888 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 479546 81031999 ~ 81033476 (+)
G190832 NA non-coding upstream 14699 80536827 ~ 80537335 (+)
G190760 NA non-coding upstream 68583 80483176 ~ 80483451 (+)
G190742 NA non-coding upstream 81751 80470038 ~ 80470283 (+)
G190654 NA non-coding upstream 115235 80424667 ~ 80436799 (+)
G190578 NA non-coding upstream 201147 80350632 ~ 80350887 (+)
G190890 NA non-coding downstream 21108 80573561 ~ 80573765 (+)
G190897 NA non-coding downstream 25783 80578236 ~ 80578455 (+)
G190898 NA non-coding downstream 26624 80579077 ~ 80579324 (+)
G190902 NA non-coding downstream 30152 80582605 ~ 80582999 (+)
G190918 NA non-coding downstream 43027 80595480 ~ 80595798 (+)
LOC110496993 LOC106561317 other upstream 2045102 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2281989 78267289 ~ 78270045 (+)
G187260 NA other upstream 2374451 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2503234 78047373 ~ 78066844 (+)
G191052 NA other downstream 202688 80755141 ~ 80756647 (+)
G191057 accs other downstream 212879 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 513101 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 531375 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1813832 82366183 ~ 82393779 (+)

Expression


Co-expression Network