G190930 (yo84)


Basic Information

Item Value
gene id G190930
gene name yo84
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80603788 ~ 80604101 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216307
acatagcagtgaaagttaacattatgttttcgaatgacatccccaagaggtaaaatatatagtgaaaacaatagtggtcctaaaacggaaccttgaggaacaccgaaatgtacagttgatttgtcagaggacaaacgattcacagagacaaactgatatatttccgactgataagatctaaaccaggccagaacttgtccgtgcagaccaatttgggtttccaatctctccaaaagaatgtggtgatcgatggtatcaaaagcagcactaaggtctaggagcacgaggacagatgcagagcctcggtttgatgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216307 True 314 lncRNA 0.36 1 80603788 80604101

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 555606 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1367879 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1452429 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1672312 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 2023598 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 120259 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 175958 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 386877 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 425240 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 427898 81031999 ~ 81033476 (+)
G190927 NA non-coding upstream 2575 80601002 ~ 80601213 (+)
G190918 NA non-coding upstream 7990 80595480 ~ 80595798 (+)
G190902 NA non-coding upstream 20789 80582605 ~ 80582999 (+)
G190898 NA non-coding upstream 24464 80579077 ~ 80579324 (+)
G190897 NA non-coding upstream 25333 80578236 ~ 80578455 (+)
G190937 NA non-coding downstream 7042 80611143 ~ 80611365 (+)
G190946 NA non-coding downstream 13958 80618059 ~ 80618259 (+)
G190947 LOC106581475 non-coding downstream 14380 80618481 ~ 80618736 (+)
G190951 NA non-coding downstream 15914 80620015 ~ 80620227 (+)
G190954 NA non-coding downstream 16767 80620868 ~ 80621330 (+)
LOC110496993 LOC106561317 other upstream 2096856 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2333743 78267289 ~ 78270045 (+)
G187260 NA other upstream 2426205 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2554988 78047373 ~ 78066844 (+)
G191052 NA other downstream 151040 80755141 ~ 80756647 (+)
G191057 accs other downstream 161231 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 461453 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 479727 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1762184 82366183 ~ 82393779 (+)

Expression


Co-expression Network