G190951


Basic Information

Item Value
gene id G190951
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80620015 ~ 80620227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216328
ggccaggtggactgggacagtaaggagtcatcataccaggtagtcctgacgcatggtcctagggctcaggtcctccgagagagagaaagagagaattagagagagcatacttaaattcacacaggacaccggataagactcccattcggagtcagtgtcactgtgaaagaaatgttcagttagaatagtttcataTATGAGCCCTGTattaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216328 True 213 lncRNA 0.46 1 80620015 80620227

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 571833 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1384106 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1468656 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1688539 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 2039825 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 104133 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 159832 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 370751 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 409114 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 411772 81031999 ~ 81033476 (+)
G190947 LOC106581475 non-coding upstream 1279 80618481 ~ 80618736 (+)
G190946 NA non-coding upstream 1756 80618059 ~ 80618259 (+)
G190937 NA non-coding upstream 8650 80611143 ~ 80611365 (+)
G190930 yo84 non-coding upstream 15914 80603788 ~ 80604101 (+)
G190927 NA non-coding upstream 18802 80601002 ~ 80601213 (+)
G190954 NA non-coding downstream 641 80620868 ~ 80621330 (+)
G190975 NA non-coding downstream 14672 80634899 ~ 80635899 (+)
G190977 NA non-coding downstream 19570 80639797 ~ 80640087 (+)
G190986 NA non-coding downstream 28425 80648652 ~ 80648988 (+)
G191028 NA non-coding downstream 83870 80704097 ~ 80704327 (+)
LOC110496993 LOC106561317 other upstream 2113083 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2349970 78267289 ~ 78270045 (+)
G187260 NA other upstream 2442432 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2571215 78047373 ~ 78066844 (+)
G191052 NA other downstream 134914 80755141 ~ 80756647 (+)
G191057 accs other downstream 145105 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 445327 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 463601 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1746058 82366183 ~ 82393779 (+)

Expression


Co-expression Network