G190954


Basic Information

Item Value
gene id G190954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80620868 ~ 80621330 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216331
agccaaatgtgatgtacaaaacggagctatttctaatacacaaagaatatttttggaaaaactgagcatctgctatctaactgagagtctcctcattgaaaacatcagaagttcttcaaaggtaagttattttatttgaaggctttacttgtttttgtgatagttgcctgctaaatgctaacgctaatgctaacgctaaatgctacactagctagctactgttacacaaatgattgttttcctatggttgaaaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctgagCTTGAGagatagcatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatggtaatgagcttaggtctataaatagaatcccggatccgggtttggtcgtcgcaacaggttttaagaggtacagtataataaacatatatgtagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216331 True 463 lncRNA 0.41 1 80620868 80621330

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 572686 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1384959 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1469509 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1689392 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 2040678 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 103030 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 158729 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 369648 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 408011 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 410669 81031999 ~ 81033476 (+)
G190951 NA non-coding upstream 641 80620015 ~ 80620227 (+)
G190947 LOC106581475 non-coding upstream 2132 80618481 ~ 80618736 (+)
G190946 NA non-coding upstream 2609 80618059 ~ 80618259 (+)
G190937 NA non-coding upstream 9503 80611143 ~ 80611365 (+)
G190930 yo84 non-coding upstream 16767 80603788 ~ 80604101 (+)
G190975 NA non-coding downstream 13569 80634899 ~ 80635899 (+)
G190977 NA non-coding downstream 18467 80639797 ~ 80640087 (+)
G190986 NA non-coding downstream 27322 80648652 ~ 80648988 (+)
G191028 NA non-coding downstream 82767 80704097 ~ 80704327 (+)
G191025 cssa10h11orf74 non-coding downstream 86768 80708098 ~ 80708730 (+)
LOC110496993 LOC106561317 other upstream 2113936 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2350823 78267289 ~ 78270045 (+)
G187260 NA other upstream 2443285 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2572068 78047373 ~ 78066844 (+)
G191052 NA other downstream 133811 80755141 ~ 80756647 (+)
G191057 accs other downstream 144002 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 444224 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 462498 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1744955 82366183 ~ 82393779 (+)

Expression


Co-expression Network