G190986


Basic Information

Item Value
gene id G190986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80648652 ~ 80648988 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216363
ttCATACCACACACACTTTTAACCCATCCGGTTTCCTGCCACAAAAAACTACCTAAttaggatatacagttgaagtcggaagtttacatacacttaggttggagtcattaaaactggtttttcaaccactccacaaatttcttgttaacaaactataattttggcaagtcggttaggacatctactttgtgcatgacacaagtcatttttccaacaattgtttacagacagattatttcacttataattcactgtatcacaattccagtgggtcagaagtttacatacactaaattgactgaaatacagtgccttgcgaaagtattcggcccccttg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216363 True 337 lncRNA 0.33 1 80648652 80648988

Neighbor

gene id symbol gene type direction distance location
LOC110497165 lrrc4c coding upstream 600470 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1412743 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1497293 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1717176 78931423 ~ 78931476 (+)
LOC110497055 LOC106561315 coding upstream 2068462 78578149 ~ 78580190 (+)
rag2 rag2 coding downstream 75372 80724360 ~ 80727535 (+)
furinb LOC106561302 coding downstream 131071 80780059 ~ 80977313 (+)
LOC110497237 rccd1 coding downstream 341990 80988887 ~ 80994869 (+)
LOC110502143 LOC106573336 coding downstream 380353 81029341 ~ 81031876 (+)
LOC118942351 NA coding downstream 383011 81031999 ~ 81033476 (+)
G190977 NA non-coding upstream 8565 80639797 ~ 80640087 (+)
G190975 NA non-coding upstream 12753 80634899 ~ 80635899 (+)
G190954 NA non-coding upstream 27322 80620868 ~ 80621330 (+)
G190951 NA non-coding upstream 28425 80620015 ~ 80620227 (+)
G190947 LOC106581475 non-coding upstream 29916 80618481 ~ 80618736 (+)
G191028 NA non-coding downstream 55109 80704097 ~ 80704327 (+)
G191025 cssa10h11orf74 non-coding downstream 59110 80708098 ~ 80708730 (+)
G191024 cssa10h11orf74 non-coding downstream 72522 80721510 ~ 80722580 (+)
G191161 NA non-coding downstream 261740 80910728 ~ 81327424 (+)
G191167 NA non-coding downstream 265312 80914300 ~ 80924722 (+)
LOC110496993 LOC106561317 other upstream 2141720 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2378607 78267289 ~ 78270045 (+)
G187260 NA other upstream 2471069 78137513 ~ 78177583 (+)
LOC110502077 LOC106561326 other upstream 2599852 78047373 ~ 78066844 (+)
G191052 NA other downstream 106153 80755141 ~ 80756647 (+)
G191057 accs other downstream 116344 80765332 ~ 80766714 (+)
LOC110497314 cfap44 other downstream 416566 81058184 ~ 81080502 (+)
LOC110497320 paf other downstream 434840 81083756 ~ 81086188 (+)
LOC110497665 LOC106561427 other downstream 1717297 82366183 ~ 82393779 (+)

Expression


Co-expression Network