Gene
RNA
| Item | Value |
|---|---|
| gene id | G191509 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 80655809 ~ 80656010 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase TRAIP isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU216951 | True | 202 | lncRNA | 0.40 | 1 | 80655809 | 80656010 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ehf | ehf | coding | downstream | 1261820 | 79386283 ~ 79393989 (-) |
| LOC110502133 | pdhx | coding | downstream | 1305761 | 79304316 ~ 79350048 (-) |
| LOC110502122 | LOC106561308 | coding | downstream | 1378833 | 79243612 ~ 79276976 (-) |
| LOC110497116 | fjx1 | coding | downstream | 1605847 | 79047432 ~ 79049962 (-) |
| LOC110497088 | trim44 | coding | downstream | 1657547 | 78926451 ~ 78998262 (-) |
| iftap | cssa10h11orf74 | coding | upstream | 52089 | 80708099 ~ 80725419 (-) |
| rag1 | rag1 | coding | upstream | 71893 | 80727903 ~ 80734996 (-) |
| si:ch211-256a21.4 | LOC106561345 | coding | upstream | 99040 | 80755050 ~ 80765470 (-) |
| accs | accs | coding | upstream | 109945 | 80765955 ~ 80776358 (-) |
| LOC110497262 | cib1 | coding | upstream | 339012 | 80995022 ~ 80999005 (-) |
| G191497 | NA | non-coding | downstream | 13475 | 80642121 ~ 80642334 (-) |
| G191494 | NA | non-coding | downstream | 19133 | 80636401 ~ 80636676 (-) |
| G190964 | NA | non-coding | downstream | 29195 | 80626415 ~ 80626614 (-) |
| G190963 | NA | non-coding | downstream | 29693 | 80625899 ~ 80626116 (-) |
| G190959 | NA | non-coding | downstream | 32774 | 80622724 ~ 80623035 (-) |
| G191582 | NA | non-coding | upstream | 149146 | 80805156 ~ 80825746 (-) |
| G191668 | LOC106562530 | non-coding | upstream | 258648 | 80914658 ~ 80919928 (-) |
| G191669 | LOC100380853 | non-coding | upstream | 259669 | 80915679 ~ 80921415 (-) |
| G191727 | LOC106561285 | non-coding | upstream | 393531 | 81049541 ~ 81052986 (-) |
| G191777 | paf | non-coding | upstream | 427551 | 81083561 ~ 81086179 (-) |
| G190857 | NA | other | downstream | 103325 | 80552127 ~ 80552484 (-) |
| G189806 | NA | other | downstream | 895182 | 79760039 ~ 79760627 (-) |
| G189256 | NA | other | downstream | 1289240 | 79365849 ~ 79366569 (-) |
| G189093 | slc1a2 | other | downstream | 1430811 | 79223230 ~ 79224998 (-) |
| G188257 | NA | other | downstream | 2038502 | 78616582 ~ 78617307 (-) |
| cart2 | LOC105018397 | other | upstream | 536518 | 81192528 ~ 81194099 (-) |
| G193745 | NA | other | upstream | 2245630 | 82901640 ~ 82912504 (-) |
| G193755 | NA | other | upstream | 2349820 | 83005830 ~ 83007976 (-) |
| LOC110502187 | NA | other | upstream | 2564012 | 83219964 ~ 83223972 (-) |
