Gene
RNA
| Item | Value |
|---|---|
| gene id | G191025 |
| gene name | cssa10h11orf74 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 80708098 ~ 80708730 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein C11orf74 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU216404 | True | 369 | lncRNA | 0.34 | 2 | 80708098 | 80708730 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497165 | lrrc4c | coding | upstream | 659916 | 79916922 ~ 80048182 (+) |
| LOC110497158 | LOC106573351 | coding | upstream | 1472189 | 79177028 ~ 79235909 (+) |
| LOC110497132 | pamr1 | coding | upstream | 1556739 | 79103574 ~ 79151359 (+) |
| LOC118944149 | NA | coding | upstream | 1776622 | 78931423 ~ 78931476 (+) |
| LOC110497055 | LOC106561315 | coding | upstream | 2127908 | 78578149 ~ 78580190 (+) |
| rag2 | rag2 | coding | downstream | 15630 | 80724360 ~ 80727535 (+) |
| furinb | LOC106561302 | coding | downstream | 71329 | 80780059 ~ 80977313 (+) |
| LOC110497237 | rccd1 | coding | downstream | 282248 | 80988887 ~ 80994869 (+) |
| LOC110502143 | LOC106573336 | coding | downstream | 320611 | 81029341 ~ 81031876 (+) |
| LOC118942351 | NA | coding | downstream | 323269 | 81031999 ~ 81033476 (+) |
| G191028 | NA | non-coding | upstream | 3771 | 80704097 ~ 80704327 (+) |
| G190986 | NA | non-coding | upstream | 59110 | 80648652 ~ 80648988 (+) |
| G190977 | NA | non-coding | upstream | 68011 | 80639797 ~ 80640087 (+) |
| G190975 | NA | non-coding | upstream | 72199 | 80634899 ~ 80635899 (+) |
| G190954 | NA | non-coding | upstream | 86768 | 80620868 ~ 80621330 (+) |
| G191024 | cssa10h11orf74 | non-coding | downstream | 12780 | 80721510 ~ 80722580 (+) |
| G191161 | NA | non-coding | downstream | 201998 | 80910728 ~ 81327424 (+) |
| G191167 | NA | non-coding | downstream | 205570 | 80914300 ~ 80924722 (+) |
| LOC110496993 | LOC106561317 | other | upstream | 2201166 | 78467699 ~ 78519071 (+) |
| G187320 | LOC106561323 | other | upstream | 2438053 | 78267289 ~ 78270045 (+) |
| G187260 | NA | other | upstream | 2530515 | 78137513 ~ 78177583 (+) |
| LOC110502077 | LOC106561326 | other | upstream | 2659298 | 78047373 ~ 78066844 (+) |
| G191052 | NA | other | downstream | 46411 | 80755141 ~ 80756647 (+) |
| G191057 | accs | other | downstream | 56602 | 80765332 ~ 80766714 (+) |
| LOC110497314 | cfap44 | other | downstream | 356824 | 81058184 ~ 81080502 (+) |
| LOC110497320 | paf | other | downstream | 375098 | 81083756 ~ 81086188 (+) |
| LOC110497665 | LOC106561427 | other | downstream | 1657555 | 82366183 ~ 82393779 (+) |
