G191161


Basic Information

Item Value
gene id G191161
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 80910728 ~ 81327424 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU216551
gaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttgggttatgtctctatcagttttgcacatcgagagactgaatttttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttcttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcaggctccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttgcttttacgccaaacataac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216551 True 593 lncRNA 0.44 2 80910728 81327424

Neighbor

gene id symbol gene type direction distance location
rag2 rag2 coding upstream 183193 80724360 ~ 80727535 (+)
LOC110497165 lrrc4c coding upstream 862546 79916922 ~ 80048182 (+)
LOC110497158 LOC106573351 coding upstream 1674819 79177028 ~ 79235909 (+)
LOC110497132 pamr1 coding upstream 1759369 79103574 ~ 79151359 (+)
LOC118944149 NA coding upstream 1979252 78931423 ~ 78931476 (+)
rhcg1-b rhcg1-b coding downstream 171163 81498587 ~ 81515506 (+)
LOC110497588 LOC106561277 coding downstream 287348 81614772 ~ 81641800 (+)
LOC110497605 LOC106561274 coding downstream 375359 81702783 ~ 81772438 (+)
LOC110497665 LOC106561427 coding downstream 1038759 82366183 ~ 82393779 (+)
LOC110497686 NA coding downstream 1090370 82417794 ~ 82426875 (+)
G191024 cssa10h11orf74 non-coding upstream 188148 80721510 ~ 80722580 (+)
G191025 cssa10h11orf74 non-coding upstream 201998 80708098 ~ 80708730 (+)
G191028 NA non-coding upstream 206401 80704097 ~ 80704327 (+)
G190986 NA non-coding upstream 261740 80648652 ~ 80648988 (+)
G190977 NA non-coding upstream 270641 80639797 ~ 80640087 (+)
G191402 NA non-coding downstream 7654 81335078 ~ 81335608 (+)
G191405 NA non-coding downstream 15040 81342464 ~ 81342689 (+)
G191406 NA non-coding downstream 16204 81343628 ~ 81343850 (+)
G192071 NA non-coding downstream 209701 81537125 ~ 81537623 (+)
G192082 NA non-coding downstream 230297 81557721 ~ 81558024 (+)
G191057 accs other upstream 144014 80765332 ~ 80766714 (+)
G191052 NA other upstream 154081 80755141 ~ 80756647 (+)
LOC110497055 LOC106561315 other upstream 2330666 78578149 ~ 78580190 (+)
LOC110496993 LOC106561317 other upstream 2403796 78467699 ~ 78519071 (+)
G187320 LOC106561323 other upstream 2640683 78267289 ~ 78270045 (+)
G193170 bhlh3 other downstream 1073689 82401113 ~ 82403835 (+)
G193339 LOC106561425 other downstream 1325209 82652633 ~ 82654430 (+)
LOC110497837 tmem263 other downstream 1791903 83119221 ~ 83124965 (+)

Expression


Co-expression Network