G192382


Basic Information

Item Value
gene id G192382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 81774402 ~ 81775886 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU217944
agacaATACTCTTCTCATCAATTatcttttaaaaaatatactCAAACTGGAAATCAGCCAATCCTCCGTCATTCACAGAATTgaaaggtcaaatgctttattatcaacaaaacaaaaaagtcaAGAGTGTGGGCAATGGAGAGAAACAAAATTGTGCAGGCTGAGGCCATGTGGCAAAAAGTGATAGGGAGTTAGGGGTGGAgactagtgggtctgggcaggtgtgataaAACATAAATCATCTTGAACGGCATTAATCACTTGCACCATGTattttttaatgtaatctcaactgcaatccagctCATCCGGTTATGCTATTAGATTAAGCAGTGATACCATAATCTGTTgtgtaaataaacaaaatatctggcattgtattcccatttaaactttgctgtgcttttaaatggttgaaagcgcagtgatagacatttgggtgaAAACTAAACCAAACATCTGACAATGTTTTTccatttggttgtgcttttaatAAATGGTTgtaagcatagtgataacacattggaaattcaactaacttttgactgtctttttgcgtgggtgaatataggttgtaatctctGATCaccgtctcaaccaaatattaccaaGTTATCCACGTTGAAAAtatgtggtgtgcccagtgggtttggcCTGGCTTACTCAAACACTCAATATGCATATTTCCTTATTCACTTCCCTGATGCAACACAATTGAATAGGTGTAAGCAATGGTTTAAATTTAATCACAGTTTTCACCCATCATGTTATATTGGCAATTACTTCAAGGGAAAGATAATTTATAGGAAAGAGAATTTAACACACACAGTATTTCAGAGCCTGGGAGATATAAAAGGGGTGTTGAGGAAATGTGTTAGCCATAAACAGTGACTCCTCTGCCCTGGTGTTTCAGCTGAGCGTGAGCCAGCGTCAGAGACATCCtggctcggggggggggggggctttgtttTTACAAGATTATAACAAGTGCTGATTTATTTCCCTGGAAACCCTTTATGTTgggcttttatttttattttcatttcagTCCAAACTATGTTCTCTGCATTTTACGTATCTCAGGATAACCCTTATCCTTATTGTAAAGCTTCACTAGGGGGGAGATTTCCAAGGCATGGAGGTGGATAGTTCcctggtagcctggtcccagaatgTGCTTTAGCCAACTCCCCTGACGGCCATTGTCATGCCATACATACAACGAGGAGTTGGCTAAGCATATACCAATCTACGATCAGGGTGGATGGGCCTGCCATCAAAATAACATGGGAACATGTAGGTAGGTATTGAGAGAAGGGAGTCATTTCACCCTCTCTGGTCTctgcccatctctccctcctttaaACTCAgccaccccatccctccatcattcATCGCTGTTTTTCAGCAGATTACTGTGGCGGCGTCCAGAAGGCCCATGTCGTTGCCGTGGCAACCACTCCAGTCCCCTGGCCAGGGCCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU217944 True 1485 lncRNA 0.42 1 81774402 81775886

Neighbor

gene id symbol gene type direction distance location
ces2b LOC106561275 coding downstream 84323 81651729 ~ 81690079 (-)
fanci fanci coding downstream 161459 81588076 ~ 81612943 (-)
trnar-ucg-2 NA coding downstream 189357 81584973 ~ 81585045 (-)
LOC110497573 NA coding downstream 193537 81567914 ~ 81580865 (-)
LOC110497556 LOC100380647 coding downstream 298857 81414069 ~ 81475545 (-)
LOC110497629 rask coding upstream 564738 82340624 ~ 82353376 (-)
LOC110497676 bhlh3 coding upstream 625213 82401099 ~ 82405402 (-)
LOC110497694 LOC100196824 coding upstream 653472 82429358 ~ 82599381 (-)
LOC110497706 LOC106561425 coding upstream 871497 82647383 ~ 82690189 (-)
LOC110497714 LOC106561424 coding upstream 923384 82699270 ~ 82730321 (-)
G192308 NA non-coding downstream 122966 81651232 ~ 81651436 (-)
G192306 NA non-coding downstream 125270 81648418 ~ 81649132 (-)
G192304 NA non-coding downstream 127561 81645677 ~ 81646841 (-)
G192259 NA non-coding downstream 229080 81545107 ~ 81545322 (-)
G192812 NA non-coding upstream 82817 81858703 ~ 81859065 (-)
G192870 NA non-coding upstream 162150 81938036 ~ 81938363 (-)
G192991 NA non-coding upstream 348810 82124696 ~ 82126059 (-)
G193083 NA non-coding upstream 487399 82263285 ~ 82263572 (-)
G193112 NA non-coding upstream 538421 82314307 ~ 82314482 (-)
cart2 LOC105018397 other downstream 580557 81192528 ~ 81194099 (-)
G191669 LOC100380853 other downstream 852987 80915679 ~ 80921415 (-)
G190857 NA other downstream 1221918 80552127 ~ 80552484 (-)
G189806 NA other downstream 2013775 79760039 ~ 79760627 (-)
G189256 NA other downstream 2407833 79365849 ~ 79366569 (-)
G193745 NA other upstream 1125754 82901640 ~ 82912504 (-)
G193755 NA other upstream 1229944 83005830 ~ 83007976 (-)
LOC110502187 NA other upstream 1444136 83219964 ~ 83223972 (-)
G194491 NA other upstream 1839680 83615566 ~ 83616034 (-)
G195427 NA other upstream 2105654 83881540 ~ 83904451 (-)

Expression


Co-expression Network