Gene
RNA
| Item | Value |
|---|---|
| gene id | G192526 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 81987898 ~ 81989027 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU218109 | True | 276 | lncRNA | 0.32 | 2 | 81987898 | 81989027 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497605 | LOC106561274 | coding | upstream | 215460 | 81702783 ~ 81772438 (+) |
| LOC110497588 | LOC106561277 | coding | upstream | 346098 | 81614772 ~ 81641800 (+) |
| rhcg1-b | rhcg1-b | coding | upstream | 472392 | 81498587 ~ 81515506 (+) |
| nedd1 | nedd1 | coding | upstream | 704382 | 81266020 ~ 81283516 (+) |
| sh3gl3b | LOC106561291 | coding | upstream | 724720 | 81251925 ~ 81263178 (+) |
| LOC110497665 | LOC106561427 | coding | downstream | 377156 | 82366183 ~ 82393779 (+) |
| LOC110497686 | NA | coding | downstream | 428767 | 82417794 ~ 82426875 (+) |
| LOC110497700 | LOC106561426 | coding | downstream | 618728 | 82607755 ~ 82644833 (+) |
| LOC110497717 | LOC106561423 | coding | downstream | 750571 | 82739598 ~ 82755517 (+) |
| LOC110497777 | NA | coding | downstream | 816513 | 82805540 ~ 82826762 (+) |
| G192515 | NA | non-coding | upstream | 12167 | 81974730 ~ 81975731 (+) |
| G192485 | NA | non-coding | upstream | 55403 | 81931986 ~ 81932495 (+) |
| G192087 | NA | non-coding | upstream | 212139 | 81774422 ~ 81775759 (+) |
| G192144 | NA | non-coding | upstream | 329631 | 81655025 ~ 81658267 (+) |
| G192092 | NA | non-coding | upstream | 339316 | 81648349 ~ 81648582 (+) |
| G192654 | NA | non-coding | downstream | 155289 | 82144316 ~ 82144900 (+) |
| G192687 | NA | non-coding | downstream | 216763 | 82205790 ~ 82207623 (+) |
| G192693 | NA | non-coding | downstream | 229064 | 82218091 ~ 82218381 (+) |
| G192716 | NA | non-coding | downstream | 259538 | 82248565 ~ 82249623 (+) |
| G193121 | NA | non-coding | downstream | 336990 | 82326017 ~ 82326245 (+) |
| LOC110497320 | paf | other | upstream | 901718 | 81083756 ~ 81086188 (+) |
| LOC110497314 | cfap44 | other | upstream | 917023 | 81058184 ~ 81080502 (+) |
| G191057 | accs | other | upstream | 1221184 | 80765332 ~ 80766714 (+) |
| G191052 | NA | other | upstream | 1231251 | 80755141 ~ 80756647 (+) |
| LOC110497055 | LOC106561315 | other | upstream | 3407836 | 78578149 ~ 78580190 (+) |
| G193170 | bhlh3 | other | downstream | 412086 | 82401113 ~ 82403835 (+) |
| G193339 | LOC106561425 | other | downstream | 663606 | 82652633 ~ 82654430 (+) |
| LOC110497837 | tmem263 | other | downstream | 1130300 | 83119221 ~ 83124965 (+) |
