G193646


Basic Information

Item Value
gene id G193646
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 82697955 ~ 82706835 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU219332
catttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgaatacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaattttttcccattcctccttgcaaaacagttcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggataagtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaactttaaccatcttccctgtcccaggcccaaaccatgatgctgcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219332 True 522 lncRNA 0.43 2 82697955 82706835

Neighbor

gene id symbol gene type direction distance location
LOC110497706 LOC106561425 coding downstream 7766 82647383 ~ 82690189 (-)
LOC110497694 LOC100196824 coding downstream 98574 82429358 ~ 82599381 (-)
LOC110497676 bhlh3 coding downstream 292553 82401099 ~ 82405402 (-)
LOC110497629 rask coding downstream 344579 82340624 ~ 82353376 (-)
ces2b LOC106561275 coding downstream 1007876 81651729 ~ 81690079 (-)
LOC110497727 ube2n coding upstream 24188 82731023 ~ 82740774 (-)
LOC110497735 LOC106561422 coding upstream 50896 82757731 ~ 82790510 (-)
slc17a8 LOC106561421 coding upstream 99951 82806786 ~ 82848071 (-)
LOC110497815 ric8b coding upstream 301285 83008120 ~ 83022102 (-)
LOC110502165 LOC106561413 coding upstream 320219 83027054 ~ 83057970 (-)
G193532 NA non-coding downstream 326666 82356820 ~ 82371289 (-)
G193123 NA non-coding downstream 369817 82327782 ~ 82328138 (-)
G193118 NA non-coding downstream 379786 82317966 ~ 82318169 (-)
G193112 NA non-coding downstream 383473 82314307 ~ 82314482 (-)
G193083 NA non-coding downstream 434383 82263285 ~ 82263572 (-)
G193683 NA non-coding upstream 91631 82798466 ~ 82798694 (-)
G193684 NA non-coding upstream 92194 82799029 ~ 82799245 (-)
G193735 NA non-coding upstream 178368 82885203 ~ 82889796 (-)
G193780 LOC106561419 non-coding upstream 237517 82944352 ~ 82945094 (-)
G193786 NA non-coding upstream 245897 82952732 ~ 82954510 (-)
cart2 LOC105018397 other downstream 1504110 81192528 ~ 81194099 (-)
G191669 LOC100380853 other downstream 1776540 80915679 ~ 80921415 (-)
G190857 NA other downstream 2145471 80552127 ~ 80552484 (-)
G189806 NA other downstream 2937328 79760039 ~ 79760627 (-)
G189256 NA other downstream 3331386 79365849 ~ 79366569 (-)
G193745 NA other upstream 194805 82901640 ~ 82912504 (-)
G193755 NA other upstream 298995 83005830 ~ 83007976 (-)
LOC110502187 NA other upstream 513187 83219964 ~ 83223972 (-)
G194491 NA other upstream 908731 83615566 ~ 83616034 (-)
G195427 NA other upstream 1174705 83881540 ~ 83904451 (-)

Expression


Co-expression Network