G193415


Basic Information

Item Value
gene id G193415
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 82801266 ~ 82801558 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU219063
ctatttcacatgcttgttcaatgaaccatcaacaattaatgaacatgcatctgtggaacggtcgttaagacactaacagcttacagacggtaggcaattaggtcacagttatgaaaacttaggacactaaagaggcctttctactgactctgaaaaacaacaaaagaaagatgcccagggtatTTACACgttttaagtttgctgaaaataaacgcagttgacagtgagaggacgataattttgttgctgagtttagtcATTGCTTGCTAGGAATATGTGTCCAAATAATACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219063 True 293 lncRNA 0.38 1 82801266 82801558

Neighbor

gene id symbol gene type direction distance location
LOC110497717 LOC106561423 coding upstream 45749 82739598 ~ 82755517 (+)
LOC110497700 LOC106561426 coding upstream 156433 82607755 ~ 82644833 (+)
LOC110497686 NA coding upstream 374391 82417794 ~ 82426875 (+)
LOC110497665 LOC106561427 coding upstream 407487 82366183 ~ 82393779 (+)
LOC110497605 LOC106561274 coding upstream 1028828 81702783 ~ 81772438 (+)
LOC110497777 NA coding downstream 3982 82805540 ~ 82826762 (+)
arntl2 LOC106561420 coding downstream 54359 82855917 ~ 82889873 (+)
ppfibp1b LOC106561419 coding downstream 92211 82893769 ~ 82954111 (+)
LOC110497803 LOC106561416 coding downstream 162970 82964528 ~ 82973775 (+)
si:dkey-103i16.6 LOC106561415 coding downstream 176689 82978247 ~ 83002869 (+)
G193393 LOC106561422 non-coding upstream 22771 82771215 ~ 82778495 (+)
G193392 NA non-coding upstream 44487 82756434 ~ 82756779 (+)
G193394 NA non-coding upstream 59793 82741210 ~ 82741473 (+)
G193389 ube2n non-coding upstream 60699 82735316 ~ 82740567 (+)
G193390 NA non-coding upstream 67916 82731058 ~ 82733350 (+)
G193474 NA non-coding downstream 153273 82954831 ~ 82955057 (+)
G193513 NA non-coding downstream 220238 83021796 ~ 83022094 (+)
G193857 NA non-coding downstream 290518 83092076 ~ 83092412 (+)
G193855 polr3b non-coding downstream 295006 83096564 ~ 83099389 (+)
G193339 LOC106561425 other upstream 146836 82652633 ~ 82654430 (+)
G193170 bhlh3 other upstream 397431 82401113 ~ 82403835 (+)
LOC110497320 paf other upstream 1715086 81083756 ~ 81086188 (+)
LOC110497837 tmem263 other downstream 317769 83119221 ~ 83124965 (+)
G194395 NA other downstream 757362 83558920 ~ 83559598 (+)
G195155 NA other downstream 1794852 84596410 ~ 84600324 (+)
LOC110498034 LOC106573178 other downstream 2208906 85010068 ~ 85054392 (+)
G197069 NA other downstream 3334058 86135616 ~ 86136608 (+)

Expression


Co-expression Network