G193886


Basic Information

Item Value
gene id G193886
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83132273 ~ 83132488 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU219593
gacgtcagtgatcttcatgtcgtagctctagaaagaggcccgagttccgaATAtacaattccaagttggatgaaagttcaaaatgtattttcccagtcgtagctcgtttttcccgagttcccagttgtcttgaactcactaaattcagattttgcagttccaagttaacagttgttttgagcgcggcacaaatcatgTTTCATTGACAGCAtagcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219593 True 216 lncRNA 0.42 1 83132273 83132488

Neighbor

gene id symbol gene type direction distance location
LOC110497837 tmem263 coding upstream 8477 83119221 ~ 83124965 (+)
LOC110497829 LOC106561410 coding upstream 13673 83116088 ~ 83118600 (+)
si:dkey-103i16.6 LOC106561415 coding upstream 129404 82978247 ~ 83002869 (+)
LOC110497803 LOC106561416 coding upstream 158498 82964528 ~ 82973775 (+)
ppfibp1b LOC106561419 coding upstream 178162 82893769 ~ 82954111 (+)
LOC110502176 cry1 coding downstream 70874 83203362 ~ 83204801 (+)
LOC110497849 mterf2 coding downstream 81741 83214229 ~ 83216248 (+)
LOC110497874 btbd11 coding downstream 108781 83241269 ~ 83344652 (+)
LOC110502210 LOC106561405 coding downstream 245159 83377647 ~ 83395033 (+)
LOC110497881 LOC106561403 coding downstream 268471 83400959 ~ 83408768 (+)
G193880 LOC106613263 non-coding upstream 3682 83128123 ~ 83128591 (+)
G193853 NA non-coding upstream 26439 83104932 ~ 83105834 (+)
G193855 polr3b non-coding upstream 32884 83096564 ~ 83099389 (+)
G193857 NA non-coding upstream 39861 83092076 ~ 83092412 (+)
G193513 NA non-coding upstream 110179 83021796 ~ 83022094 (+)
G193905 NA non-coding downstream 21772 83154260 ~ 83154472 (+)
G193912 NA non-coding downstream 32052 83164540 ~ 83164868 (+)
G193916 NA non-coding downstream 34610 83167098 ~ 83167307 (+)
G193923 NA non-coding downstream 47530 83180018 ~ 83180349 (+)
G193930 NA non-coding downstream 54705 83187193 ~ 83187423 (+)
G193339 LOC106561425 other upstream 477843 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 710091 82417794 ~ 82426875 (+)
G193170 bhlh3 other upstream 728438 82401113 ~ 82403835 (+)
LOC110497665 LOC106561427 other upstream 743752 82366183 ~ 82393779 (+)
G194395 NA other downstream 426432 83558920 ~ 83559598 (+)
G195155 NA other downstream 1463922 84596410 ~ 84600324 (+)
LOC110498034 LOC106573178 other downstream 1877976 85010068 ~ 85054392 (+)
G197069 NA other downstream 3003128 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 3905023 87037511 ~ 87039236 (+)

Expression


Co-expression Network