G194380


Basic Information

Item Value
gene id G194380
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83524251 ~ 83524472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU220175
aaGCATGCATGAGAGTGCCAGCTattctggacaactgtgtgatcacgctctccgtagctgatgtgagtaagacctttaaacaggtcaacattcacaagaccgtGACGCCAGACTGATTATCAGGACATGTACTCAgaacatgcgctgaccaactggcaagtgtctccactgacattttcaacctctccctgaccgagtctgtaatacgtacatgtttcaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220175 True 222 lncRNA 0.47 1 83524251 83524472

Neighbor

gene id symbol gene type direction distance location
LOC110497903 LOC106561401 coding upstream 52468 83433218 ~ 83471783 (+)
LOC110497890 LOC106561402 coding upstream 101901 83408936 ~ 83422350 (+)
LOC110497881 LOC106561403 coding upstream 115483 83400959 ~ 83408768 (+)
LOC110502210 LOC106561405 coding upstream 129218 83377647 ~ 83395033 (+)
LOC110497874 btbd11 coding upstream 179599 83241269 ~ 83344652 (+)
LOC110497928 LOC106561399 coding downstream 137479 83661951 ~ 83682409 (+)
LOC110497962 tmem5 coding downstream 289728 83814200 ~ 83818689 (+)
LOC110497968 LOC106561395 coding downstream 299111 83823583 ~ 83979825 (+)
LOC110497974 LOC106561394 coding downstream 476608 84001080 ~ 84025490 (+)
LOC110497999 LOC106561392 coding downstream 653600 84178072 ~ 84295747 (+)
G194374 NA non-coding upstream 16242 83507790 ~ 83508009 (+)
G194371 NA non-coding upstream 21866 83502169 ~ 83502385 (+)
G194368 NA non-coding upstream 24013 83499829 ~ 83500238 (+)
G194366 NA non-coding upstream 25574 83498441 ~ 83498677 (+)
G194267 NA non-coding upstream 91817 83432197 ~ 83432434 (+)
G194362 NA non-coding downstream 70427 83594899 ~ 83597212 (+)
G194594 NA non-coding downstream 225544 83750016 ~ 83750257 (+)
G194595 NA non-coding downstream 226065 83750537 ~ 83750842 (+)
G194603 NA non-coding downstream 240001 83764473 ~ 83764767 (+)
G194610 NA non-coding downstream 247499 83771971 ~ 83772186 (+)
LOC110497837 tmem263 other upstream 399286 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 869821 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 1102069 82417794 ~ 82426875 (+)
G193170 bhlh3 other upstream 1120416 82401113 ~ 82403835 (+)
LOC110497665 LOC106561427 other upstream 1135730 82366183 ~ 82393779 (+)
G194395 NA other downstream 34448 83558920 ~ 83559598 (+)
G195155 NA other downstream 1071938 84596410 ~ 84600324 (+)
LOC110498034 LOC106573178 other downstream 1485992 85010068 ~ 85054392 (+)
G197069 NA other downstream 2611144 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 3513039 87037511 ~ 87039236 (+)

Expression


Co-expression Network