G194445


Basic Information

Item Value
gene id G194445
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83537963 ~ 83614214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU220244
ttctgaaactatccgccaccattgtcgcaacccctattaccagcctgttcaacctctctttcatatcgtctgagatccccaaagattggaaagctgccgcagtcatccccctcttcaaagggggagacaccctggacccaaactgttacagacctatatccatcctgccctgcctatctaaggtcttcgaaagccaagtcaacaaacaggtcactgaccatctcgaatcccactgtaccttctccgctgtgcaatctggtttccgagccggtcacgggtgcacctcagccacactcaaggtactaaacgatatcataaccgccatcgataaaagacagtactgtgcagccgtcttcatcgaccttgccaaggctttcgactctgtcaatcaccatattcttatcggcagactcagtagactcggtttttcggatgactgccttgcctggttcaccaattactttgcagacagagttcagtgtgtcaaatcggagggcatgctgtccggtcctctggcagtctctatgggggtgccacagggttcaattctcgggccgactctctCCTCTGTATA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220244 True 574 lncRNA 0.51 2 83537963 83614214

Neighbor

gene id symbol gene type direction distance location
LOC110497857 cry1 coding downstream 298847 83224373 ~ 83239116 (-)
LOC110502187 NA coding downstream 313991 83219964 ~ 83223972 (-)
LOC110497842 LOC106561444 coding downstream 368928 83155680 ~ 83169035 (-)
LOC118936835 NA coding downstream 416843 83114353 ~ 83121120 (-)
LOC110497820 polr3b coding downstream 426749 83069019 ~ 83111214 (-)
LOC110497937 LOC106561440 coding upstream 121497 83735711 ~ 83777336 (-)
LOC118944150 NA coding upstream 135403 83749617 ~ 83749671 (-)
LOC110497945 LOC106561398 coding upstream 165158 83779372 ~ 83791825 (-)
LOC118942895 NA coding upstream 184290 83798504 ~ 83800597 (-)
LOC110497954 LOC106561396 coding upstream 194991 83809205 ~ 83812698 (-)
G194442 NA non-coding downstream 5597 83531987 ~ 83532366 (-)
G194439 NA non-coding downstream 15159 83522498 ~ 83522804 (-)
G194438 NA non-coding downstream 17926 83519791 ~ 83520037 (-)
G194437 NA non-coding downstream 18796 83518964 ~ 83519167 (-)
G194434 NA non-coding downstream 28104 83509541 ~ 83509859 (-)
G194493 NA non-coding upstream 2489 83616703 ~ 83617011 (-)
G194502 NA non-coding upstream 8161 83622375 ~ 83622578 (-)
G194504 NA non-coding upstream 9845 83624059 ~ 83624789 (-)
G194677 NA non-coding upstream 136435 83750649 ~ 83751035 (-)
G194678 NA non-coding upstream 137561 83751775 ~ 83752015 (-)
G193755 NA other downstream 529987 83005830 ~ 83007976 (-)
G193745 NA other downstream 625459 82901640 ~ 82912504 (-)
cart2 LOC105018397 other downstream 2344118 81192528 ~ 81194099 (-)
G191669 LOC100380853 other downstream 2616548 80915679 ~ 80921415 (-)
G194491 NA other upstream 1352 83615566 ~ 83616034 (-)
G195427 NA other upstream 267326 83881540 ~ 83904451 (-)
G195486 LOC106573171 other upstream 363751 83977965 ~ 83982167 (-)
LOC110498022 LOC106561385 other upstream 995520 84596433 ~ 84910878 (-)
G197498 slc25a18 other upstream 2222085 85831239 ~ 85843493 (-)

Expression


Co-expression Network