G194677



Basic Information


Item Value
gene id G194677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83750649 ~ 83751035 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU220484
attacataagtattcagaccctttgttatgagactcgaaattgagctcaggcacATCCTGTTATCCATTATCATCCATTattgtgatgtttctacaacttgattggagttcacttgtggtaaattcaattgattggacataatttggaaaagcacacgtcacaccctgatctgtttcacctgtcctcgttattgtctctaccccctccacgtgtcgcttattttccccggtgtatttatccctgtgtttcctgtctctctgtgccagttcatcttgtatgtttcaagtcaaccagcgtttttttcCCCGTACTCCTGCCTTTGCTGTTCtcttttttctagtcctcccggttttgacccttgcctgtttctggactttgtacccgcc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU220484 True 387 lncRNA 0.43 1 83750649 83751035

Neighbor


gene id symbol gene type direction distance location
LOC118944150 NA coding downstream 978 83749617 ~ 83749671 (-)
LOC110497857 cry1 coding downstream 511533 83224373 ~ 83239116 (-)
LOC110502187 NA coding downstream 526677 83219964 ~ 83223972 (-)
LOC110497842 LOC106561444 coding downstream 581614 83155680 ~ 83169035 (-)
LOC118936835 NA coding downstream 629529 83114353 ~ 83121120 (-)
LOC110497945 LOC106561398 coding upstream 28337 83779372 ~ 83791825 (-)
LOC118942895 NA coding upstream 47469 83798504 ~ 83800597 (-)
LOC110497954 LOC106561396 coding upstream 58170 83809205 ~ 83812698 (-)
tbxas1 LOC106561393 coding upstream 279681 84030716 ~ 84175738 (-)
LOC110502226 LOC106573176 coding upstream 805431 84556466 ~ 84585407 (-)
G194504 NA non-coding downstream 125860 83624059 ~ 83624789 (-)
G194502 NA non-coding downstream 128071 83622375 ~ 83622578 (-)
G194493 NA non-coding downstream 133638 83616703 ~ 83617011 (-)
G194445 NA non-coding downstream 136435 83537963 ~ 83614214 (-)
G194442 NA non-coding downstream 218283 83531987 ~ 83532366 (-)
G194678 NA non-coding upstream 740 83751775 ~ 83752015 (-)
G194683 NA non-coding upstream 6581 83757616 ~ 83757845 (-)
G194684 NA non-coding upstream 6882 83757917 ~ 83758159 (-)
G194690 NA non-coding upstream 15620 83766655 ~ 83766869 (-)
G195377 NA non-coding upstream 53775 83804810 ~ 83805012 (-)
G194491 NA other downstream 134615 83615566 ~ 83616034 (-)
G193755 NA other downstream 742673 83005830 ~ 83007976 (-)
G193745 NA other downstream 838145 82901640 ~ 82912504 (-)
cart2 LOC105018397 other downstream 2556804 81192528 ~ 81194099 (-)
G195427 NA other upstream 130505 83881540 ~ 83904451 (-)
G195486 LOC106573171 other upstream 226930 83977965 ~ 83982167 (-)
LOC110498022 LOC106561385 other upstream 858699 84596433 ~ 84910878 (-)
G197498 slc25a18 other upstream 2085264 85831239 ~ 85843493 (-)
G197554 NA other upstream 2208810 85959845 ~ 85963665 (-)

Expression



Co-expression Network