G194611 (LOC106581772)


Basic Information

Item Value
gene id G194611
gene name LOC106581772
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83772822 ~ 83773070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU220411
GCgtatgtgtctctggtgcgcaaagTGCTTGggagactgctggagcatgacctatacatcaaggctgagaagtgtgtgttctccaaatgagccgtctcctttctgggttatcgcatttccacctcgggggtggtgatggagtgtgaccgcgttaagGCCGtacgtaattggccgactccaaccacggtgaaagaggtgcagcggtttttagggtttgccaattactacaggaggtttatccggggtttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU220411 True 249 lncRNA 0.52 1 83772822 83773070

Neighbor

gene id symbol gene type direction distance location
LOC110497928 LOC106561399 coding upstream 90413 83661951 ~ 83682409 (+)
LOC110502224 LOC106561400 coding upstream 161526 83498149 ~ 83611296 (+)
LOC110497903 LOC106561401 coding upstream 301039 83433218 ~ 83471783 (+)
LOC110497890 LOC106561402 coding upstream 350472 83408936 ~ 83422350 (+)
LOC110497881 LOC106561403 coding upstream 364054 83400959 ~ 83408768 (+)
LOC110497962 tmem5 coding downstream 41130 83814200 ~ 83818689 (+)
LOC110497968 LOC106561395 coding downstream 50513 83823583 ~ 83979825 (+)
LOC110497974 LOC106561394 coding downstream 228010 84001080 ~ 84025490 (+)
LOC110497999 LOC106561392 coding downstream 405002 84178072 ~ 84295747 (+)
LOC110498007 LOC106561389 coding downstream 523486 84296556 ~ 84382755 (+)
G194610 NA non-coding upstream 636 83771971 ~ 83772186 (+)
G194603 NA non-coding upstream 8055 83764473 ~ 83764767 (+)
G194595 NA non-coding upstream 21980 83750537 ~ 83750842 (+)
G194594 NA non-coding upstream 22565 83750016 ~ 83750257 (+)
G194362 NA non-coding upstream 175610 83594899 ~ 83597212 (+)
G194777 NA non-coding downstream 146300 83919370 ~ 83925243 (+)
G194788 NA non-coding downstream 175001 83948071 ~ 83949452 (+)
G194804 NA non-coding downstream 257659 84030729 ~ 84032440 (+)
G194806 LOC106561393 non-coding downstream 305218 84078288 ~ 84142920 (+)
G194947 NA non-coding downstream 408260 84181330 ~ 84183318 (+)
G194395 NA other upstream 213224 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 647857 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 1118392 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 1350640 82417794 ~ 82426875 (+)
G193170 bhlh3 other upstream 1368987 82401113 ~ 82403835 (+)
G195155 NA other downstream 823340 84596410 ~ 84600324 (+)
LOC110498034 LOC106573178 other downstream 1237394 85010068 ~ 85054392 (+)
G197069 NA other downstream 2362546 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 3264441 87037511 ~ 87039236 (+)
G198575 NA other downstream 3377132 87150202 ~ 87150490 (+)

Expression


Co-expression Network