G195375


Basic Information

Item Value
gene id G195375
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 83807593 ~ 83808362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU221237
ctttccacagattctcaattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttttaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacatctccgtcccagtctcaggtcttttgcagactccatcaggttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttcccagtggggatggtgtgttcatggtgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttagtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacaactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagatcatccagagtgatcatgggcctcttggctgcatctctaatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatctggctttaaacttcttcacaacagtatctcggacctgcctggtg

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU221237 True 770 lncRNA 0.42 1 83807593 83808362

Neighbor

gene id symbol gene type direction distance location
LOC118942895 NA coding downstream 6996 83798504 ~ 83800597 (-)
LOC110497945 LOC106561398 coding downstream 15768 83779372 ~ 83791825 (-)
LOC110497937 LOC106561440 coding downstream 30257 83735711 ~ 83777336 (-)
LOC118944150 NA coding downstream 57922 83749617 ~ 83749671 (-)
LOC110497857 cry1 coding downstream 568477 83224373 ~ 83239116 (-)
LOC110497954 LOC106561396 coding upstream 843 83809205 ~ 83812698 (-)
tbxas1 LOC106561393 coding upstream 222354 84030716 ~ 84175738 (-)
LOC110502226 LOC106573176 coding upstream 748104 84556466 ~ 84585407 (-)
LOC110498022 LOC106561385 coding upstream 788571 84596433 ~ 84910878 (-)
LOC110498041 LOC106561383 coding upstream 1250385 85058747 ~ 85102785 (-)
G195378 NA non-coding downstream 2184 83805099 ~ 83805409 (-)
G195377 NA non-coding downstream 2581 83804810 ~ 83805012 (-)
G194690 NA non-coding downstream 40724 83766655 ~ 83766869 (-)
G194684 NA non-coding downstream 49434 83757917 ~ 83758159 (-)
G194683 NA non-coding downstream 49748 83757616 ~ 83757845 (-)
G195445 LOC106561395 non-coding upstream 106001 83914363 ~ 83915156 (-)
G195450 LOC103371712 non-coding upstream 117016 83925378 ~ 83926069 (-)
G195458 NA non-coding upstream 131624 83939986 ~ 83940416 (-)
G195462 NA non-coding upstream 136911 83945273 ~ 83945489 (-)
G195476 NA non-coding upstream 155774 83964136 ~ 83965047 (-)
G194491 NA other downstream 191559 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 584449 83219964 ~ 83223972 (-)
G193755 NA other downstream 799617 83005830 ~ 83007976 (-)
G193745 NA other downstream 895089 82901640 ~ 82912504 (-)
cart2 LOC105018397 other downstream 2613748 81192528 ~ 81194099 (-)
G195427 NA other upstream 73178 83881540 ~ 83904451 (-)
G195486 LOC106573171 other upstream 169603 83977965 ~ 83982167 (-)
G197498 slc25a18 other upstream 2027937 85831239 ~ 85843493 (-)
G197554 NA other upstream 2151483 85959845 ~ 85963665 (-)

Expression


Co-expression Network