Gene
RNA
| Item | Value |
|---|---|
| gene id | G194788 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 83948071 ~ 83949452 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU220603 | False | 394 | lncRNA | 0.44 | 3 | 83948071 | 83949452 |
| TU220604 | True | 227 | lncRNA | 0.32 | 2 | 83949096 | 83949452 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497962 | tmem5 | coding | upstream | 129382 | 83814200 ~ 83818689 (+) |
| LOC110497928 | LOC106561399 | coding | upstream | 265662 | 83661951 ~ 83682409 (+) |
| LOC110502224 | LOC106561400 | coding | upstream | 336775 | 83498149 ~ 83611296 (+) |
| LOC110497903 | LOC106561401 | coding | upstream | 476288 | 83433218 ~ 83471783 (+) |
| LOC110497890 | LOC106561402 | coding | upstream | 525721 | 83408936 ~ 83422350 (+) |
| LOC110497974 | LOC106561394 | coding | downstream | 51628 | 84001080 ~ 84025490 (+) |
| LOC110497999 | LOC106561392 | coding | downstream | 228620 | 84178072 ~ 84295747 (+) |
| LOC110498007 | LOC106561389 | coding | downstream | 347104 | 84296556 ~ 84382755 (+) |
| LOC110498015 | LOC106561386 | coding | downstream | 474919 | 84424371 ~ 84541661 (+) |
| LOC110498034 | LOC106573178 | coding | downstream | 1060616 | 85010068 ~ 85054392 (+) |
| G194777 | NA | non-coding | upstream | 22828 | 83919370 ~ 83925243 (+) |
| G194611 | LOC106581772 | non-coding | upstream | 175001 | 83772822 ~ 83773070 (+) |
| G194610 | NA | non-coding | upstream | 175885 | 83771971 ~ 83772186 (+) |
| G194603 | NA | non-coding | upstream | 183304 | 83764473 ~ 83764767 (+) |
| G194595 | NA | non-coding | upstream | 197229 | 83750537 ~ 83750842 (+) |
| G194804 | NA | non-coding | downstream | 81277 | 84030729 ~ 84032440 (+) |
| G194806 | LOC106561393 | non-coding | downstream | 128836 | 84078288 ~ 84142920 (+) |
| G194947 | NA | non-coding | downstream | 231878 | 84181330 ~ 84183318 (+) |
| G195158 | NA | non-coding | downstream | 654500 | 84603952 ~ 84685605 (+) |
| G194395 | NA | other | upstream | 388473 | 83558920 ~ 83559598 (+) |
| LOC110497837 | tmem263 | other | upstream | 823106 | 83119221 ~ 83124965 (+) |
| G193339 | LOC106561425 | other | upstream | 1293641 | 82652633 ~ 82654430 (+) |
| LOC110497686 | NA | other | upstream | 1525889 | 82417794 ~ 82426875 (+) |
| G193170 | bhlh3 | other | upstream | 1544236 | 82401113 ~ 82403835 (+) |
| G195155 | NA | other | downstream | 646958 | 84596410 ~ 84600324 (+) |
| G197069 | NA | other | downstream | 2186164 | 86135616 ~ 86136608 (+) |
| G198417 | LOC106561459 | other | downstream | 3088059 | 87037511 ~ 87039236 (+) |
| G198575 | NA | other | downstream | 3200750 | 87150202 ~ 87150490 (+) |
