Gene
RNA
| Item | Value |
|---|---|
| gene id | G195476 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 83964136 ~ 83965047 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| SLIT-ROBO Rho GTPase-activating protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU221341 | True | 283 | lncRNA | 0.37 | 2 | 83964136 | 83965047 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497954 | LOC106561396 | coding | downstream | 151438 | 83809205 ~ 83812698 (-) |
| LOC118942895 | NA | coding | downstream | 163539 | 83798504 ~ 83800597 (-) |
| LOC110497945 | LOC106561398 | coding | downstream | 172311 | 83779372 ~ 83791825 (-) |
| LOC110497937 | LOC106561440 | coding | downstream | 186800 | 83735711 ~ 83777336 (-) |
| tbxas1 | LOC106561393 | coding | upstream | 65669 | 84030716 ~ 84175738 (-) |
| LOC110502226 | LOC106573176 | coding | upstream | 591419 | 84556466 ~ 84585407 (-) |
| LOC110498022 | LOC106561385 | coding | upstream | 631886 | 84596433 ~ 84910878 (-) |
| LOC110498041 | LOC106561383 | coding | upstream | 1093700 | 85058747 ~ 85102785 (-) |
| LOC110502232 | LOC106561380 | coding | upstream | 1505892 | 85470939 ~ 85487796 (-) |
| G195462 | NA | non-coding | downstream | 18647 | 83945273 ~ 83945489 (-) |
| G195458 | NA | non-coding | downstream | 23720 | 83939986 ~ 83940416 (-) |
| G195450 | LOC103371712 | non-coding | downstream | 38067 | 83925378 ~ 83926069 (-) |
| G195445 | LOC106561395 | non-coding | downstream | 48980 | 83914363 ~ 83915156 (-) |
| G195375 | NA | non-coding | downstream | 155774 | 83807593 ~ 83808362 (-) |
| G195520 | NA | non-coding | upstream | 63016 | 84028063 ~ 84028514 (-) |
| G195521 | NA | non-coding | upstream | 63745 | 84028792 ~ 84029106 (-) |
| G195566 | NA | non-coding | upstream | 120747 | 84085794 ~ 84094354 (-) |
| G195567 | NA | non-coding | upstream | 121509 | 84086556 ~ 84087684 (-) |
| G195568 | NA | non-coding | upstream | 125719 | 84090766 ~ 84092282 (-) |
| G195427 | NA | other | downstream | 59685 | 83881540 ~ 83904451 (-) |
| G194491 | NA | other | downstream | 348102 | 83615566 ~ 83616034 (-) |
| LOC110502187 | NA | other | downstream | 740992 | 83219964 ~ 83223972 (-) |
| G193755 | NA | other | downstream | 956160 | 83005830 ~ 83007976 (-) |
| G193745 | NA | other | downstream | 1051632 | 82901640 ~ 82912504 (-) |
| G195486 | LOC106573171 | other | upstream | 12918 | 83977965 ~ 83982167 (-) |
| G197498 | slc25a18 | other | upstream | 1871252 | 85831239 ~ 85843493 (-) |
| G197554 | NA | other | upstream | 1994798 | 85959845 ~ 85963665 (-) |
| G198342 | LOC100194703 | other | upstream | 2937989 | 86903036 ~ 86903956 (-) |
