G194947



Basic Information


Item Value
gene id G194947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 84181330 ~ 84183318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU220783
TGTGAAAGTGTTTCATAGAATaagctaagccagggaaaggtggtACTAGGAACTGTGAGAGCAGGCAGTGACTGTGTGTAAGCCCTGTTGAAGCGGGAGGGATATGTGAGTGCGCTGATGTGTCTGTCTGGTGAAATGGTTCACAGGTGTGCTGCTCTGGCGGTTTGGTTTGGTGAGGAACAGATGGGTGCAGGTTGAGTTCTGACAGACCTGAAATGACAGGTTGGAGGCCAGGCTGAACAGAGCATTTGCAGGCAATACACAGTTAGACTGTAATGTTACTGTGTGTAGCCTATTTCTACAGgctctattctattctgtcaGCACATTTTCTGCAACAACTTTGTTATGTGGACAGAGAGACTAGATCAGAAAGAAGAGCAATTATCTTTAATTGGTTGTAGTATGCATAATGTCTTGATTCCTGAACATTTCAGAACTGACAACATTCAAGGCTGCAAGGCCCATTCACTCTAGGGCAGgtcgatatggccaaaatactgAATCATATCACAGTACTTTTCAAAATGTTGACCGTATGTTACGGTATTTTATGTTTTATAATAATaccatttcttttttttctttttttaaaagttttgaacatatacacacacacacagacaagacaaagcaatattaataatatactcaactagaaaaaaataaaaaataaaaataaaaataaataaaaaaaatagctttaaagataccataccttagacaagttaaacacaccaggcagaaggctacagaggttaaagggcaatctatagtacagggacagagcaaacacctcaATACCATTTCTAAATTGCTTTAtgagtagtgtgtgatcctagggtggcaacacatatatTCTCAATATTTCAATGAGTCTTTCTTCATTCTGATTGAATTGTACTGTTCAATTAAACTTCAACCAAAAATAAATGTCTTTATTGTCatcaatttctgcatttcctgcactcatttgagatcatttccccACTACCATCTAGGGCTGCCCTACATTGGCAAAACATCTCGGCATtctttttaaccaaatgttggaATTGCAATTTGACTTTTAACAATTTAGATCAGAACACTtaggtgaactgttggaatcatataAATAGAATGCTTTCTATAATTGTATAGTTACAATATAATAGTGGGCCCTTTGGATATGTTGTTTGAAATGACAACAAATTCAAATGctagggaggagttattgtgacagtgTAAGAACCAGTGTttctaggggaccctataatttTTGCCTACATTAAAGGTTTTCTCTTAGCTATTTCATGTAGCTAGCATATTCATGCGTTGCCTAATCCTCTTTGGTTGAGaggatactgttgcacaaacaacatgctgatttaggcctacaccaccactggtatcaggctgtatagctagctacgtttgctctgactcagtatatttattagctagctagccagctaactagcgattagcattagcggGTAACACGATTTAGccacaacttgctaagaaaatacaaacttgctgtttgcagatgtaagaaacacaaattAATAGTGTATTTATAGAacgcttgtggatttatattaaacgcaaagtgtaaacagcatctttgtcatcaacattgttgcatgtgctgcattgaccatattttaattttgtatttaaaaaaaaaatgtaaccttaatTTATGTAgccattttttaaattataaataaataaatcaataaaattgaccatgcagactgaacacaAGTGTCTCTTGGACAAGCAAAAACAAATACACTCCTTGAGTGGCAGGGGtggggctaggtctgtgtggaaagcagcatggagggagagagagcagaaag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU220783 True 1850 lncRNA 0.41 2 84181330 84183318
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110497974 LOC106561394 coding upstream 155840 84001080 ~ 84025490 (+)
LOC110497968 LOC106561395 coding upstream 201505 83823583 ~ 83979825 (+)
LOC110497962 tmem5 coding upstream 362641 83814200 ~ 83818689 (+)
LOC110497928 LOC106561399 coding upstream 498921 83661951 ~ 83682409 (+)
LOC110502224 LOC106561400 coding upstream 570034 83498149 ~ 83611296 (+)
LOC110498007 LOC106561389 coding downstream 113238 84296556 ~ 84382755 (+)
LOC110498015 LOC106561386 coding downstream 241053 84424371 ~ 84541661 (+)
LOC110498034 LOC106573178 coding downstream 826750 85010068 ~ 85054392 (+)
LOC110498064 NA coding downstream 1008696 85192014 ~ 85194828 (+)
LOC118937296 NA coding downstream 1013291 85196609 ~ 85198102 (+)
G194806 LOC106561393 non-coding upstream 38410 84078288 ~ 84142920 (+)
G194804 NA non-coding upstream 148890 84030729 ~ 84032440 (+)
G194788 NA non-coding upstream 231878 83948071 ~ 83949452 (+)
G194777 NA non-coding upstream 256087 83919370 ~ 83925243 (+)
G194611 LOC106581772 non-coding upstream 408260 83772822 ~ 83773070 (+)
LOC110497999 LOC106561392 non-coding downstream 106294 84178072 ~ 84295747 (+)
G195158 NA non-coding downstream 420634 84603952 ~ 84685605 (+)
G195247 NA non-coding downstream 543368 84726686 ~ 84727394 (+)
G195296 NA non-coding downstream 609249 84792567 ~ 84800126 (+)
G195297 NA non-coding downstream 613918 84797236 ~ 84804707 (+)
G194395 NA other upstream 621732 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 1056365 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 1526900 82652633 ~ 82654430 (+)
LOC110497686 NA other upstream 1759148 82417794 ~ 82426875 (+)
G193170 bhlh3 other upstream 1777495 82401113 ~ 82403835 (+)
G195155 NA other downstream 413092 84596410 ~ 84600324 (+)
G197069 NA other downstream 1952298 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 2854193 87037511 ~ 87039236 (+)
G198575 NA other downstream 2966884 87150202 ~ 87150490 (+)

Expression


G194947 Expression in all Baseline Samples

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G194947 Expression in each Bioproject

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G194947 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 30.
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Co-expression Network