Item | Value |
---|---|
gene id | G194947 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 84181330 ~ 84183318 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU220783 | True | 1850 | lncRNA | 0.41 | 2 | 84181330 | 84183318 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110497974 | LOC106561394 | coding | upstream | 155840 | 84001080 ~ 84025490 (+) |
LOC110497968 | LOC106561395 | coding | upstream | 201505 | 83823583 ~ 83979825 (+) |
LOC110497962 | tmem5 | coding | upstream | 362641 | 83814200 ~ 83818689 (+) |
LOC110497928 | LOC106561399 | coding | upstream | 498921 | 83661951 ~ 83682409 (+) |
LOC110502224 | LOC106561400 | coding | upstream | 570034 | 83498149 ~ 83611296 (+) |
LOC110498007 | LOC106561389 | coding | downstream | 113238 | 84296556 ~ 84382755 (+) |
LOC110498015 | LOC106561386 | coding | downstream | 241053 | 84424371 ~ 84541661 (+) |
LOC110498034 | LOC106573178 | coding | downstream | 826750 | 85010068 ~ 85054392 (+) |
LOC110498064 | NA | coding | downstream | 1008696 | 85192014 ~ 85194828 (+) |
LOC118937296 | NA | coding | downstream | 1013291 | 85196609 ~ 85198102 (+) |
G194806 | LOC106561393 | non-coding | upstream | 38410 | 84078288 ~ 84142920 (+) |
G194804 | NA | non-coding | upstream | 148890 | 84030729 ~ 84032440 (+) |
G194788 | NA | non-coding | upstream | 231878 | 83948071 ~ 83949452 (+) |
G194777 | NA | non-coding | upstream | 256087 | 83919370 ~ 83925243 (+) |
G194611 | LOC106581772 | non-coding | upstream | 408260 | 83772822 ~ 83773070 (+) |
LOC110497999 | LOC106561392 | non-coding | downstream | 106294 | 84178072 ~ 84295747 (+) |
G195158 | NA | non-coding | downstream | 420634 | 84603952 ~ 84685605 (+) |
G195247 | NA | non-coding | downstream | 543368 | 84726686 ~ 84727394 (+) |
G195296 | NA | non-coding | downstream | 609249 | 84792567 ~ 84800126 (+) |
G195297 | NA | non-coding | downstream | 613918 | 84797236 ~ 84804707 (+) |
G194395 | NA | other | upstream | 621732 | 83558920 ~ 83559598 (+) |
LOC110497837 | tmem263 | other | upstream | 1056365 | 83119221 ~ 83124965 (+) |
G193339 | LOC106561425 | other | upstream | 1526900 | 82652633 ~ 82654430 (+) |
LOC110497686 | NA | other | upstream | 1759148 | 82417794 ~ 82426875 (+) |
G193170 | bhlh3 | other | upstream | 1777495 | 82401113 ~ 82403835 (+) |
G195155 | NA | other | downstream | 413092 | 84596410 ~ 84600324 (+) |
G197069 | NA | other | downstream | 1952298 | 86135616 ~ 86136608 (+) |
G198417 | LOC106561459 | other | downstream | 2854193 | 87037511 ~ 87039236 (+) |
G198575 | NA | other | downstream | 2966884 | 87150202 ~ 87150490 (+) |