G195734


Basic Information

Item Value
gene id G195734
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 84381566 ~ 84419895 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU221646
TGTGGAATATTAGATGGTGCTAAACCACACACTTTAGCACCAACTGTTAAGACCTATAGAACCCTTGTTGAGAGAAAATCATTTAACTTAATATTGAGACTACTATGATCCAAAACAGTCAGTGGTTGTTGGAGTGAACAGAGCCTGGTTAAGACTCtcgaacagacagacaggcaagtaGAATAAGACAGGATGGGGGACATAAGTATGAGAGAACCAAAGGGAGGGGGATCCATAAGGTACATGTTGGTCATGAGGAGCCAAAGTAGTGTGTGtctggtgtacagtactgtagccggtgcaggtagcctagtggttaagagtgttaggccagtaaccacaaggccactagttcaaatccctgagctgactaggagaaaatctgttgatgttcccttatgcaaggcacttaaccctaattgctcctgtaagttgctttggataagagtGTTGTGGAGTGAAACTGGGATATACAGTATTTGGGACAATGTTCAACACTGATATAGTATTAATTCATCCAAGTCAGTGAATAAATGTAGTTTAACCCTACAACTAAAATCAATAATTTCTCttttattttattgaaatgaAATATCACTTCAATGCCCACAGCAAAGCAATGTGTGTGGAGTTTGTTGAAAATGTTactgaacaaaatgtaaaaaaaatattgaacaaAGACAAATGGAGGTAATAAAACACGAGGCAAGTCCATTCAAGAATAAAAATAACATAATATGCACAAAACATCTCAAGTTGACAAGATTGACTGAGCAGTAAACTGTGAACAattaaaacacagtacatgtagCTGAACATTTCAATACTGCGTGGAAAAAGGAGGAAATAGATGAAGAATACCCTGGAGATTGAACGAGTGTGAGCACTGACCCTGCTTCTCAGCTGAGAAAATACTGCATTTCCTTCAGCAATTCAATGCATAATTGACTTGACCTATGAATCTTTCAATTACATTTCAGTTGGTGTGACTTGAAGGATATTCACTGAGAAAAGCCAAGTGCAACCCAGTAGTTTGCATACAGTGAATTAAATAGATCAGATTGCATGCCTGGATCTATTAGCTTAATAAAATTGAATAGGCGCTGCAATCTGCATGTAAAGGTACTGTCAATCACTTTGATTTGTTTGCAGGTCAGAACATTTTATAAAATGCCACAAATGAATTATTATACACAATAAATGATCTTAGTGTAATAACTATAGAAATAATGCTGTCATATAGGTTCACCATGTGTTGGAATTTAAAGTCTTAACAAGGTAGCATCCTCAACAACCTGGATATATAAGGTCAAATGTGGACATTGTGCTGAAGATgttgacaacaaagtcaatgtagtTGCATTGGTAAAATAATGTGTATTACCATTTTATTTGGGAATTTTTTTcccagaaatgtggtgggtactctcttcgttcgcaggACTtaatcctgctaactgttccgtatgtccaaactgaatttggtaatttggtatgtactctgcgccatcgccTTGGAATGCCTTTGTTGTTTTATGATTTCGTTATATCCCtgtggtttttactagattacttgtagtttgtCTGTTAtggtgtaatgacttggtgctgctcATCTttgccaggacgctcttgaaaaagagatttcaaatctcaatgagcccttcctggtcaaataaataataatgtatgGGAGTTGCTGAAGTATAATTATTGCAGCTCTCTGTGTCTAGTGTTGTCCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221646 True 1744 lncRNA 0.44 2 84381566 84419895

Neighbor

gene id symbol gene type direction distance location
tbxas1 LOC106561393 coding downstream 205828 84030716 ~ 84175738 (-)
LOC110497954 LOC106561396 coding downstream 568868 83809205 ~ 83812698 (-)
LOC118942895 NA coding downstream 580969 83798504 ~ 83800597 (-)
LOC110497945 LOC106561398 coding downstream 589741 83779372 ~ 83791825 (-)
LOC118944150 NA coding downstream 631895 83749617 ~ 83749671 (-)
LOC110502226 LOC106573176 coding upstream 136571 84556466 ~ 84585407 (-)
LOC110498022 LOC106561385 coding upstream 177038 84596433 ~ 84910878 (-)
LOC110498041 LOC106561383 coding upstream 638852 85058747 ~ 85102785 (-)
LOC110502232 LOC106561380 coding upstream 1051044 85470939 ~ 85487796 (-)
LOC110498116 LOC106561379 coding upstream 1118488 85538383 ~ 85545472 (-)
G195615 NA non-coding downstream 85826 84205396 ~ 84295740 (-)
G195569 NA non-coding downstream 283299 84094785 ~ 84098267 (-)
G195566 NA non-coding downstream 287212 84085794 ~ 84094354 (-)
G195568 NA non-coding downstream 289284 84090766 ~ 84092282 (-)
G195567 NA non-coding downstream 293882 84086556 ~ 84087684 (-)
G195999 NA non-coding upstream 373391 84793286 ~ 84801094 (-)
G196000 NA non-coding upstream 375999 84795894 ~ 84803467 (-)
G196029 NA non-coding upstream 430261 84850156 ~ 84850454 (-)
G196274 NA non-coding upstream 629655 85049550 ~ 85056001 (-)
G195486 LOC106573171 other downstream 399399 83977965 ~ 83982167 (-)
G195427 NA other downstream 477115 83881540 ~ 83904451 (-)
G194491 NA other downstream 765532 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 1158422 83219964 ~ 83223972 (-)
G193755 NA other downstream 1373590 83005830 ~ 83007976 (-)
G197498 slc25a18 other upstream 1416404 85831239 ~ 85843493 (-)
G197554 NA other upstream 1539950 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 2483141 86903036 ~ 86903956 (-)
G198912 NA other upstream 2902244 87322139 ~ 87326469 (-)

Expression


Co-expression Network