G196095


Basic Information

Item Value
gene id G196095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85050212 ~ 85056541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU222037
cataaaaagtgttgtttaaagtttgtcacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagattaaaccataaattgaactttttggcaacaatgcaaaacgttatgtttggcataaaagcaacacagctcatcaccctgaacacaccatccccactgtccaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacagagatttgtcttccaacaagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222037 True 355 lncRNA 0.45 2 85050212 85056541

Neighbor

gene id symbol gene type direction distance location
LOC110498015 LOC106561386 coding upstream 508551 84424371 ~ 84541661 (+)
LOC110498007 LOC106561389 coding upstream 667457 84296556 ~ 84382755 (+)
LOC110497999 LOC106561392 coding upstream 759080 84178072 ~ 84295747 (+)
LOC110497974 LOC106561394 coding upstream 1024722 84001080 ~ 84025490 (+)
LOC110497968 LOC106561395 coding upstream 1070387 83823583 ~ 83979825 (+)
LOC110498064 NA coding downstream 135473 85192014 ~ 85194828 (+)
LOC118937296 NA coding downstream 140068 85196609 ~ 85198102 (+)
LOC110498083 LOC106561381 coding downstream 149737 85206278 ~ 85367562 (+)
LOC110498095 fam180a coding downstream 408513 85465054 ~ 85470682 (+)
LOC110498104 LOC106561378 coding downstream 459078 85515619 ~ 85594581 (+)
G195297 NA non-coding upstream 245505 84797236 ~ 84804707 (+)
G195296 NA non-coding upstream 250086 84792567 ~ 84800126 (+)
G195247 NA non-coding upstream 322818 84726686 ~ 84727394 (+)
G195158 NA non-coding upstream 364607 84603952 ~ 84685605 (+)
G196301 NA non-coding downstream 48187 85104728 ~ 85104962 (+)
G196326 NA non-coding downstream 62604 85119145 ~ 85119429 (+)
G196338 NA non-coding downstream 70860 85127401 ~ 85127602 (+)
G196353 NA non-coding downstream 92914 85149455 ~ 85151792 (+)
G196522 NA non-coding downstream 331541 85388082 ~ 85393055 (+)
LOC110498034 LOC106573178 other upstream 30178 85010068 ~ 85054392 (+)
G195155 NA other upstream 449888 84596410 ~ 84600324 (+)
G194395 NA other upstream 1490614 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 1925247 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 2395782 82652633 ~ 82654430 (+)
G197069 NA other downstream 1079075 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1980970 87037511 ~ 87039236 (+)
G198575 NA other downstream 2093661 87150202 ~ 87150490 (+)
G198784 NA other downstream 2437082 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 2479395 87535936 ~ 87536928 (+)

Expression


Co-expression Network