G196301


Basic Information

Item Value
gene id G196301
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85104728 ~ 85104962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU222250
gtaggatagtcagttttacaagggtatgtttggcagcatgagtgaaggatgctttgttgtgaaataggaagccgattctagatttaattttggattggagatgcttaatgtgagtctggaaggagagtttacagtctaaccagacacctaggtatttgtagttctccacataagtcagagccatccagagtagtgatgctagatgggCGGGTGTGggaagcgatcggttgaagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222250 True 235 lncRNA 0.44 1 85104728 85104962

Neighbor

gene id symbol gene type direction distance location
LOC110498034 LOC106573178 coding upstream 50336 85010068 ~ 85054392 (+)
LOC110498015 LOC106561386 coding upstream 563067 84424371 ~ 84541661 (+)
LOC110498007 LOC106561389 coding upstream 721973 84296556 ~ 84382755 (+)
LOC110497999 LOC106561392 coding upstream 813596 84178072 ~ 84295747 (+)
LOC110497974 LOC106561394 coding upstream 1079238 84001080 ~ 84025490 (+)
LOC110498064 NA coding downstream 87052 85192014 ~ 85194828 (+)
LOC118937296 NA coding downstream 91647 85196609 ~ 85198102 (+)
LOC110498083 LOC106561381 coding downstream 101316 85206278 ~ 85367562 (+)
LOC110498095 fam180a coding downstream 360092 85465054 ~ 85470682 (+)
LOC110498104 LOC106561378 coding downstream 410657 85515619 ~ 85594581 (+)
G196095 NA non-coding upstream 48187 85050212 ~ 85056541 (+)
G195297 NA non-coding upstream 300021 84797236 ~ 84804707 (+)
G195296 NA non-coding upstream 304602 84792567 ~ 84800126 (+)
G195247 NA non-coding upstream 377334 84726686 ~ 84727394 (+)
G195158 NA non-coding upstream 419123 84603952 ~ 84685605 (+)
G196326 NA non-coding downstream 14183 85119145 ~ 85119429 (+)
G196338 NA non-coding downstream 22439 85127401 ~ 85127602 (+)
G196353 NA non-coding downstream 44493 85149455 ~ 85151792 (+)
G196522 NA non-coding downstream 283120 85388082 ~ 85393055 (+)
G196781 NA non-coding downstream 344164 85449126 ~ 85449450 (+)
G195155 NA other upstream 504404 84596410 ~ 84600324 (+)
G194395 NA other upstream 1545130 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 1979763 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 2450298 82652633 ~ 82654430 (+)
G197069 NA other downstream 1030654 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1932549 87037511 ~ 87039236 (+)
G198575 NA other downstream 2045240 87150202 ~ 87150490 (+)
G198784 NA other downstream 2388661 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 2430974 87535936 ~ 87536928 (+)

Expression


Co-expression Network