G196353


Basic Information

Item Value
gene id G196353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85149455 ~ 85151792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU222312
gttttccctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtactgcactttgagatatcagctgatgtacgaagggctatataaatacatttgaatgtggatgtcgattaaggcaggcCCCCGCACTTCTCTAatttagaggggttgggttaaatgcagaagacacatttcagttgaaggcattcagttgtacaactgactaggtagccCGCTTTACCTTAACATGTTAGTTAAGTAAACCCACAACAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222312 True 278 lncRNA 0.44 2 85149455 85151792

Neighbor

gene id symbol gene type direction distance location
LOC110498034 LOC106573178 coding upstream 95063 85010068 ~ 85054392 (+)
LOC110498015 LOC106561386 coding upstream 607794 84424371 ~ 84541661 (+)
LOC110498007 LOC106561389 coding upstream 766700 84296556 ~ 84382755 (+)
LOC110497999 LOC106561392 coding upstream 858323 84178072 ~ 84295747 (+)
LOC110497974 LOC106561394 coding upstream 1123965 84001080 ~ 84025490 (+)
LOC110498064 NA coding downstream 40222 85192014 ~ 85194828 (+)
LOC118937296 NA coding downstream 44817 85196609 ~ 85198102 (+)
LOC110498083 LOC106561381 coding downstream 54486 85206278 ~ 85367562 (+)
LOC110498095 fam180a coding downstream 313262 85465054 ~ 85470682 (+)
LOC110498104 LOC106561378 coding downstream 363827 85515619 ~ 85594581 (+)
G196338 NA non-coding upstream 21853 85127401 ~ 85127602 (+)
G196326 NA non-coding upstream 30026 85119145 ~ 85119429 (+)
G196301 NA non-coding upstream 44493 85104728 ~ 85104962 (+)
G196095 NA non-coding upstream 92914 85050212 ~ 85056541 (+)
G195297 NA non-coding upstream 344748 84797236 ~ 84804707 (+)
G196522 NA non-coding downstream 236290 85388082 ~ 85393055 (+)
G196781 NA non-coding downstream 297334 85449126 ~ 85449450 (+)
G196783 NA non-coding downstream 300124 85451916 ~ 85452121 (+)
G196788 NA non-coding downstream 306116 85457908 ~ 85458134 (+)
G196791 NA non-coding downstream 309045 85460837 ~ 85461528 (+)
G195155 NA other upstream 549131 84596410 ~ 84600324 (+)
G194395 NA other upstream 1589857 83558920 ~ 83559598 (+)
LOC110497837 tmem263 other upstream 2024490 83119221 ~ 83124965 (+)
G193339 LOC106561425 other upstream 2495025 82652633 ~ 82654430 (+)
G197069 NA other downstream 983824 86135616 ~ 86136608 (+)
G198417 LOC106561459 other downstream 1885719 87037511 ~ 87039236 (+)
G198575 NA other downstream 1998410 87150202 ~ 87150490 (+)
G198784 NA other downstream 2341831 87493623 ~ 87496735 (+)
G198811 LOC106561481 other downstream 2384144 87535936 ~ 87536928 (+)

Expression


Co-expression Network