G196643


Basic Information

Item Value
gene id G196643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85262552 ~ 85263420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU222609
gagtcatttcacacgtcaaatagagtcatttcacacgtcaaatagtgttatttcacacgtcaaatagtgtcatttcacacgtcaaatagtgtcatttcacacgtcaaatagagtcatttcacacgtcaaatagtgttatttcacacgtcaaatagtgtcatttcacacgtcaaatagtgttatttcacacgtcaaatagagtcatttcacacgtcaaatagtgtcatttcacacgtcaaatagtgttatttcacacgtcaaatagtgttatttcacacgtcaaatagtgttatttcacacgtcaaatagtgttatttcacacgtcaaatagtgttatttcacacgtcaaatagagtcatttcacacgtcaaatagagtcaTTTCACacatcaaatagtgttatttcacACGTCAAATAGAGTCATTTCACacatcaaatagtgttatttcacacgtcaaatagtgttatttcacacgtcaaatagtgttatttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU222609 True 495 lncRNA 0.34 2 85262552 85263420

Neighbor

gene id symbol gene type direction distance location
LOC110498041 LOC106561383 coding downstream 159767 85058747 ~ 85102785 (-)
LOC110498022 LOC106561385 coding downstream 351674 84596433 ~ 84910878 (-)
LOC110502226 LOC106573176 coding downstream 677145 84556466 ~ 84585407 (-)
tbxas1 LOC106561393 coding downstream 1086814 84030716 ~ 84175738 (-)
LOC110497954 LOC106561396 coding downstream 1449854 83809205 ~ 83812698 (-)
LOC110502232 LOC106561380 coding upstream 207519 85470939 ~ 85487796 (-)
LOC110498116 LOC106561379 coding upstream 274963 85538383 ~ 85545472 (-)
LOC118936851 NA coding upstream 434000 85697420 ~ 85699798 (-)
LOC110502240 nup205 coding upstream 448119 85711539 ~ 85726478 (-)
dennd11 kiaa1147 coding upstream 470839 85734259 ~ 85748399 (-)
G196594 NA non-coding downstream 63965 85194897 ~ 85198587 (-)
G196325 NA non-coding downstream 144669 85117659 ~ 85117883 (-)
G196310 NA non-coding downstream 154004 85107922 ~ 85108548 (-)
G196275 NA non-coding downstream 201532 85050180 ~ 85061020 (-)
G196274 NA non-coding downstream 206551 85049550 ~ 85056001 (-)
G196725 NA non-coding upstream 126543 85389963 ~ 85424322 (-)
G196746 NA non-coding upstream 158526 85421946 ~ 85426816 (-)
G196750 NA non-coding upstream 164817 85428237 ~ 85428648 (-)
G196757 NA non-coding upstream 168318 85431738 ~ 85434155 (-)
G196784 NA non-coding upstream 188430 85451850 ~ 85452083 (-)
G195486 LOC106573171 other downstream 1280385 83977965 ~ 83982167 (-)
G195427 NA other downstream 1358101 83881540 ~ 83904451 (-)
G194491 NA other downstream 1646518 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2039408 83219964 ~ 83223972 (-)
G197498 slc25a18 other upstream 572879 85831239 ~ 85843493 (-)
G197554 NA other upstream 696425 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1639616 86903036 ~ 86903956 (-)
G198912 NA other upstream 2058719 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 4343417 89606837 ~ 89609890 (-)

Expression


Co-expression Network