Gene
RNA
| Item | Value |
|---|---|
| gene id | G196725 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 85389963 ~ 85424322 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU222698 | True | 539 | lncRNA | 0.55 | 2 | 85389963 | 85424322 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498041 | LOC106561383 | coding | downstream | 287178 | 85058747 ~ 85102785 (-) |
| LOC110498022 | LOC106561385 | coding | downstream | 479085 | 84596433 ~ 84910878 (-) |
| LOC110502226 | LOC106573176 | coding | downstream | 804556 | 84556466 ~ 84585407 (-) |
| tbxas1 | LOC106561393 | coding | downstream | 1214225 | 84030716 ~ 84175738 (-) |
| LOC110497954 | LOC106561396 | coding | downstream | 1577265 | 83809205 ~ 83812698 (-) |
| LOC110502232 | LOC106561380 | coding | upstream | 46617 | 85470939 ~ 85487796 (-) |
| LOC110498116 | LOC106561379 | coding | upstream | 114061 | 85538383 ~ 85545472 (-) |
| LOC118936851 | NA | coding | upstream | 273098 | 85697420 ~ 85699798 (-) |
| LOC110502240 | nup205 | coding | upstream | 287217 | 85711539 ~ 85726478 (-) |
| dennd11 | kiaa1147 | coding | upstream | 309937 | 85734259 ~ 85748399 (-) |
| G196643 | NA | non-coding | downstream | 126543 | 85262552 ~ 85263420 (-) |
| G196594 | NA | non-coding | downstream | 191376 | 85194897 ~ 85198587 (-) |
| G196325 | NA | non-coding | downstream | 272080 | 85117659 ~ 85117883 (-) |
| G196310 | NA | non-coding | downstream | 281415 | 85107922 ~ 85108548 (-) |
| G196275 | NA | non-coding | downstream | 328943 | 85050180 ~ 85061020 (-) |
| G196750 | NA | non-coding | upstream | 3915 | 85428237 ~ 85428648 (-) |
| G196757 | NA | non-coding | upstream | 7416 | 85431738 ~ 85434155 (-) |
| G196784 | NA | non-coding | upstream | 27528 | 85451850 ~ 85452083 (-) |
| G197328 | NA | non-coding | upstream | 58705 | 85483027 ~ 85483625 (-) |
| G197394 | NA | non-coding | upstream | 216216 | 85640538 ~ 85684526 (-) |
| G195486 | LOC106573171 | other | downstream | 1407796 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 1485512 | 83881540 ~ 83904451 (-) |
| G194491 | NA | other | downstream | 1773929 | 83615566 ~ 83616034 (-) |
| LOC110502187 | NA | other | downstream | 2166819 | 83219964 ~ 83223972 (-) |
| G197498 | slc25a18 | other | upstream | 411977 | 85831239 ~ 85843493 (-) |
| G197554 | NA | other | upstream | 535523 | 85959845 ~ 85963665 (-) |
| G198342 | LOC100194703 | other | upstream | 1478714 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 1897817 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 4182515 | 89606837 ~ 89609890 (-) |
